PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g744670.m02 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SBP | ||||||||
Protein Properties | Length: 382aa MW: 42667.4 Da PI: 9.7682 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 131.7 | 2.5e-41 | 227 | 304 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adls+ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh l efD++krsCrrrLa+hn+rrrk+q+ Pd.00g744670.m02 227 RCQAEGCTADLSHAKHYHRRHKVCEFHSKASTVIANGLTQRFCQQCSRFHLLPEFDNGKRSCRRRLADHNRRRRKTQQ 304 6**************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 382 aa Download sequence |
MILKLVKQRI EASEKACENW KKSSCRHHHN QFFSFPKKDL VGKGAPAKTH YIITKMLDYE 60 WGNPSTVMLS PDNDPGSDPT RHHHNTTTIF DHYASQASQA SAFNNLVPPP PPPQQQSHHA 120 AFAHHFNSAQ AQQLHSIYDT HAYASASAYA PPNHHPLLSL DPIHGGAAHG LILVPKSEDL 180 CRPVDFASRI GLNLGGRTYF SSEDDFMNRL YRRTRPATET GSNHAPRCQA EGCTADLSHA 240 KHYHRRHKVC EFHSKASTVI ANGLTQRFCQ QCSRFHLLPE FDNGKRSCRR RLADHNRRRR 300 KTQQTNQENH NSQVQQLVEN ARNSSSDNVA RSPPQSAAHS ASSVTVALSP PRMTLDCFRQ 360 RPYQAAATTS SGSSSSLFFS SG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G02065.1 | 9e-56 | SBP family protein |