PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g744670.m02
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 382aa    MW: 42667.4 Da    PI: 9.7682
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g744670.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP131.72.5e-41227304178
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                       +Cq+egC+adls+ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh l efD++krsCrrrLa+hn+rrrk+q+
  Pd.00g744670.m02 227 RCQAEGCTADLSHAKHYHRRHKVCEFHSKASTVIANGLTQRFCQQCSRFHLLPEFDNGKRSCRRRLADHNRRRRKTQQ 304
                       6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    
MILKLVKQRI EASEKACENW KKSSCRHHHN QFFSFPKKDL VGKGAPAKTH YIITKMLDYE  60
WGNPSTVMLS PDNDPGSDPT RHHHNTTTIF DHYASQASQA SAFNNLVPPP PPPQQQSHHA  120
AFAHHFNSAQ AQQLHSIYDT HAYASASAYA PPNHHPLLSL DPIHGGAAHG LILVPKSEDL  180
CRPVDFASRI GLNLGGRTYF SSEDDFMNRL YRRTRPATET GSNHAPRCQA EGCTADLSHA  240
KHYHRRHKVC EFHSKASTVI ANGLTQRFCQ QCSRFHLLPE FDNGKRSCRR RLADHNRRRR  300
KTQQTNQENH NSQVQQLVEN ARNSSSDNVA RSPPQSAAHS ASSVTVALSP PRMTLDCFRQ  360
RPYQAAATTS SGSSSSLFFS SG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02065.19e-56SBP family protein