PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g744660.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 266aa    MW: 29919 Da    PI: 9.053
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g744660.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP87.61.5e-272896178
                      --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP  1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78
                      +CqvegC++ l +akeyhrrhkvCe+hska++v+v g+eqrf         lsefDe+krsCrrrLa+hnerrrk+++
  Pd.00g744660.m01 28 RCQVEGCHVPLMNAKEYHRRHKVCEMHSKASKVTVLGQEQRF---------LSEFDESKRSCRRRLAGHNERRRKSSH 96
                      6****************************************9.........9***********************976 PP

Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MSKRGRGGAA AQQLYGSRAT LALKVVPRCQ VEGCHVPLMN AKEYHRRHKV CEMHSKASKV  60
TVLGQEQRFL SEFDESKRSC RRRLAGHNER RRKSSHDSLS RTSSQEKGRF GYLSTPTGRA  120
LSLLSARNTG FDSWVSPSDL SSRSSAALRE LIAENRAAVL ARQLINSSED RNWDSSSHNH  180
ATEDLFCDHG QSWSNSVEPQ QHQMFSDHNY QHGWDRFHEG SGAHLTLDLR QAPSPAYGFL  240
PERGKTKGED DQECDLWNSF HGASVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42200.14e-27SBP family protein