PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g743380.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 197aa MW: 22242.8 Da PI: 9.9753 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 35.1 | 3e-11 | 63 | 113 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WT+eE+ l+ +v ++G g W+tI R+ ++k++w++ Pd.00g743380.m01 63 KQKWTAEEEAALKAGVLKHGAGKWRTILTDPEfnsilHLRSNVDLKDKWRN 113 79***********************************88***********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MNWQSALEFE FHSFSVIFSD PDLPICIANS FHGFDVNLLR VQNLTGQISF WKIFGFWLMG 60 APKQKWTAEE EAALKAGVLK HGAGKWRTIL TDPEFNSILH LRSNVDLKDK WRNINVTAIW 120 GSRRKAKLAL KRNLPNPKHD NNPLAVSTVI QSHEEIVDAK PLAISGGKLQ TTESKQPIAR 180 LDHLILKAIT ELPLLCT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49950.1 | 9e-47 | MYB_related family protein |