PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g739870.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 454aa    MW: 50545.6 Da    PI: 5.9687
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g739870.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS305.21.6e-93344512373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalkl..fsevsPil 91 
                       ++lL++cA+a++++d++laq++L+ l+++a +dgd++qRl+  f++AL ar ar  + +l +a++ s+++ + +++++++ +l  f +++P++
  Pd.00g739870.m01  34 EQLLVHCANAIETNDATLAQQILWVLNNIAPQDGDSNQRLTCAFLRALIARAARiGSCKLLAAMANSQANFTIHTHKFSVIELasFIDLTPWH 126
                       79****************************************************5445677777777777666777777777788******** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesg...skeeleetgerLakfAeelgvpfef 178
                       +f++ +aN aIleaveg + +Hi+D+++++++Q p+L +a+a R+    +pp l++T+ gs e +      ++ee+g++L +fA++ ++ +ef
  Pd.00g739870.m01 127 RFGFTAANAAILEAVEGYSVIHIVDLSLTHCMQIPTLVEAIAGRQegnVSPPLLKLTVAGSTEDVppmLDLSYEELGSKLVNFARSRNIILEF 219
                       *********************************************554459**********888798888999******************** PP

              GRAS 179 nvl.......vakrledleleeLrvkp.gEalaVnlvlqlhrll...............................desvsleserdevLklvk 232
                       +v+        a+ +++l++++L   + gEal+Vn++++lh+++                               +++ +++s r+ +Lk+++
  Pd.00g739870.m01 220 RVIpssytdgFANLIQQLRVQNLVYAEsGEALVVNCHMMLHYIPeetltlpsinsnpnlsscgssssygydvassSSTSTSSSLRTMFLKALR 312
                       ***8885555555555556666655559********************************************9965555556699******** PP

              GRAS 233 slsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFk 325
                       +l P++vv+v+++ad++s++++ r+ +a++y +  +d++++ lpr s++r+++E+  + ++i+nv+a eg++r+er e + +W +r+++a F+
  Pd.00g739870.m01 313 GLDPTIVVLVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAD-MCWKIENVIAYEGFQRVERVEPKCRWVQRMRNANFR 404
                       ********************************************************.9*********************************** PP

              GRAS 326 pvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                       +v+++e+a+ ++k++l +++  g+ ++ e++ +vl+Wk++++v+++aW
  Pd.00g739870.m01 405 SVSFGEDAVLEVKAMLDEHA-AGWGLKREEEDVVLTWKGHNVVFATAW 451
                       ********************.8999*********************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    
MMNKNQTHRT RPWPGFPTSA KALGTNFGDA NCMEQLLVHC ANAIETNDAT LAQQILWVLN  60
NIAPQDGDSN QRLTCAFLRA LIARAARIGS CKLLAAMANS QANFTIHTHK FSVIELASFI  120
DLTPWHRFGF TAANAAILEA VEGYSVIHIV DLSLTHCMQI PTLVEAIAGR QEGNVSPPLL  180
KLTVAGSTED VPPMLDLSYE ELGSKLVNFA RSRNIILEFR VIPSSYTDGF ANLIQQLRVQ  240
NLVYAESGEA LVVNCHMMLH YIPEETLTLP SINSNPNLSS CGSSSSYGYD VASSSSTSTS  300
SSLRTMFLKA LRGLDPTIVV LVDEDADLTS NNLVCRLRSA FNYLWIPYDT VDTFLPRGSK  360
QRQWYEADMC WKIENVIAYE GFQRVERVEP KCRWVQRMRN ANFRSVSFGE DAVLEVKAML  420
DEHAAGWGLK REEEDVVLTW KGHNVVFATA WMPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-176GRAS family protein