PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g738640.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 330aa    MW: 36902.4 Da    PI: 7.3929
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g738640.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.86e-191562148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT+eEd +l+d ++++G g+W++ +++ g++R++k+c++rw++yl
  Pd.00g738640.m01 15 RGPWTPEEDRKLLDFIQLHGHGSWSSLPQKAGLKRCGKSCRLRWRNYL 62
                      89*********************************************7 PP
2Myb_DNA-binding51.32.6e-1668112147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg+++  Ed+ +++++++lG++ W++Ia++++ +Rt++++k++w+ +
  Pd.00g738640.m01  68 RGNFSLHEDQTIIQLHALLGNR-WSAIAAHLP-KRTDNDIKNYWNAH 112
                       89********************.*********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MGKSTCFAAA SGIKRGPWTP EEDRKLLDFI QLHGHGSWSS LPQKAGLKRC GKSCRLRWRN  60
YLRPDIKRGN FSLHEDQTII QLHALLGNRW SAIAAHLPKR TDNDIKNYWN AHLKKRLAKI  120
GFDPVTHKPK TAILGSANGD PKKLSNLSHI VQWESARLQA EARLSKESEL HKSSAHQLLH  180
DQTASLTHDH LHHQFAPLVP QCLDILRASA WESLISMSTK SSSSDADAPT NHINGGQNQF  240
SFGYHHDVHE HGVNIISNFE GLTSDHQFSS MTEYDDSRAM SSMTTGSLGL NELIGQHCGT  300
ECSELFDALQ QYMGFEVVDG EAWTSLEQLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.11e-88MYB family protein