PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g738050.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 783aa MW: 88565.9 Da PI: 4.3794

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g738050.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.9	2e-07	517	565	2	47
SSS-HHHHHHHHHHH....HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdav....kqlGggtWktIartmgkgRtlkqcksrwqky 47 +rW++eE++l+ ++v + lG++ W+ + ++ Rt k+++s+++++ Pd.00g738050.m01 517 QRWSEEEEQLFHQVVfsnpASLGKNFWDNLSTIFP-SRTKKEIVSYYFNV 565 79***********4444455666******.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 783 aa Download sequence
MAIHRHCWLF TYWLLSLQQS FPHEILDLDR SVRTLDLTHN KIVDIPMEIS KLVNLQRLVL 60 AHNLIDRLPI NLAKLESLKV MTLDANRVTS LPDELGQLVR LEQLSISGNS LQYLPETIGS 120 LRNLKLLNVS NNKLKSLPES IGSCFSLEEL QADDNSIEDL PESVCNLVHL KALCLNNNNV 180 KQIPTNLLKD CKALQNISLH GNPISMDQFQ QMEGFQEFEA RRKKKFDKQI DSNVMISSKG 240 LDEGWEKVRF IEVKQFCPLV AFRIELLSSN SAICFISRRL FFEFNMVQKR PLDDEQIFVS 300 FKHPRQVGHS KELVSFSESV FPEDVSKKPQ TLGGEDVETS APGSFTISSW TTSSTSEEDS 360 LLEAPFHGSF PDCFNPERPI RTLAQSEDIY SFLLDHPPRK SVSIGPEHQA DVPLWDAQGT 420 NNNSNNLDTS EAVSNSDLED EKRLMGTCVI PMPDSDLSAD TGCIVGIGRT DCSCEDEDSV 480 RCVRQHISEA REKLIKTIGP KRFEELGFSD MGEQVAQRWS EEEEQLFHQV VFSNPASLGK 540 NFWDNLSTIF PSRTKKEIVS YYFNVFMLVK RAGQNRYDPI NVDSDNDEWQ GSNDYGDNQL 600 AVTEDEDSVV ESPICQNVPG YYQSWKDNLQ EYDEEVVDDT CDDNVNVDVF GGGTKQILDR 660 CYGLVDNCST CPIAQLQDKI SWDEKGDQEV QDDSCTSFDA AAASQENQLK SEEGNHWSGG 720 FNGSSNRGDH EYVLEPCDTK IWDAGYMTCP ENKVDFLPTC NMIEEVFGKE SWNYKARDGK 780 NLG

Sequence ? help Back to Top

Protein Sequence Length: 783 aa Download sequence

MAIHRHCWLF TYWLLSLQQS FPHEILDLDR SVRTLDLTHN KIVDIPMEIS KLVNLQRLVL  60
AHNLIDRLPI NLAKLESLKV MTLDANRVTS LPDELGQLVR LEQLSISGNS LQYLPETIGS  120
LRNLKLLNVS NNKLKSLPES IGSCFSLEEL QADDNSIEDL PESVCNLVHL KALCLNNNNV  180
KQIPTNLLKD CKALQNISLH GNPISMDQFQ QMEGFQEFEA RRKKKFDKQI DSNVMISSKG  240
LDEGWEKVRF IEVKQFCPLV AFRIELLSSN SAICFISRRL FFEFNMVQKR PLDDEQIFVS  300
FKHPRQVGHS KELVSFSESV FPEDVSKKPQ TLGGEDVETS APGSFTISSW TTSSTSEEDS  360
LLEAPFHGSF PDCFNPERPI RTLAQSEDIY SFLLDHPPRK SVSIGPEHQA DVPLWDAQGT  420
NNNSNNLDTS EAVSNSDLED EKRLMGTCVI PMPDSDLSAD TGCIVGIGRT DCSCEDEDSV  480
RCVRQHISEA REKLIKTIGP KRFEELGFSD MGEQVAQRWS EEEEQLFHQV VFSNPASLGK  540
NFWDNLSTIF PSRTKKEIVS YYFNVFMLVK RAGQNRYDPI NVDSDNDEWQ GSNDYGDNQL  600
AVTEDEDSVV ESPICQNVPG YYQSWKDNLQ EYDEEVVDDT CDDNVNVDVF GGGTKQILDR  660
CYGLVDNCST CPIAQLQDKI SWDEKGDQEV QDDSCTSFDA AAASQENQLK SEEGNHWSGG  720
FNGSSNRGDH EYVLEPCDTK IWDAGYMTCP ENKVDFLPTC NMIEEVFGKE SWNYKARDGK  780
NLG