PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g737930.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 613aa MW: 67442.1 Da PI: 10.1104

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g737930.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	42.5	1.6e-13	516	568	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g++ AeIrdp + r r+++g + t eeAa a+++a ++++g Pd.00g737930.m01 516 RYRGVRQRR-SGKFTAEIRDPA--KklSRNRVWVGCYETSEEAALAYDRASLRIHG 568 7***999.7*****84..23346**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
MLMAGSSGCA FGNSPVVCNR CGIQIVLRQV QEHAQNCPGV QPQVQQADGA LDTSASGTSA 60 TADQTQAATQ SGVAQSQAQV FQIFQIAAVQ QSQQLHLQSH PPYGTVPVAS QTQNQAQVNK 120 QQQLHPAVQT HPAARRQPLP QPQDFQVPSH SQPHPQHPHP QLHPSQPMNT TVQPQTQHPS 180 SHAVTGNHLY PQPHLHQPVQ SGAPQQRTMD MQSHGVPHSQ SQTPVQIQSQ SPQQPPVMRL 240 PQSHIPNQQQ PALLPSPGQI RNINPAQQQP VHSYAQQPGN TVQQRPLMRA VQRSIPRQYL 300 RHQPYVQQLP PTQLHPRGQS HSFPLHVHAY TQSQRNIALS QGIQLSQSNL GGSRRPMMPI 360 HGVQSQTSVQ TAGGLHMRPV HPTVHLPSTN QSNMVRTKNL VQSGANWRPT TSERHAEQES 420 ESSAEQIAKN VTHDVGTASA VVGDAEVKTV KSEMDMKSID NENKPTGEDK TNHGDTSSKE 480 IPDIHALENG ESVSQSMLNA ADQNKVRKLG VARGRRYRGV RQRRSGKFTA EIRDPAKKLS 540 RNRVWVGCYE TSEEAALAYD RASLRIHGSK AVLNFPICHI RDCLERASTC PNHRQAQRTG 600 ERGCHSFNNA EIQ

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

MLMAGSSGCA FGNSPVVCNR CGIQIVLRQV QEHAQNCPGV QPQVQQADGA LDTSASGTSA  60
TADQTQAATQ SGVAQSQAQV FQIFQIAAVQ QSQQLHLQSH PPYGTVPVAS QTQNQAQVNK  120
QQQLHPAVQT HPAARRQPLP QPQDFQVPSH SQPHPQHPHP QLHPSQPMNT TVQPQTQHPS  180
SHAVTGNHLY PQPHLHQPVQ SGAPQQRTMD MQSHGVPHSQ SQTPVQIQSQ SPQQPPVMRL  240
PQSHIPNQQQ PALLPSPGQI RNINPAQQQP VHSYAQQPGN TVQQRPLMRA VQRSIPRQYL  300
RHQPYVQQLP PTQLHPRGQS HSFPLHVHAY TQSQRNIALS QGIQLSQSNL GGSRRPMMPI  360
HGVQSQTSVQ TAGGLHMRPV HPTVHLPSTN QSNMVRTKNL VQSGANWRPT TSERHAEQES  420
ESSAEQIAKN VTHDVGTASA VVGDAEVKTV KSEMDMKSID NENKPTGEDK TNHGDTSSKE  480
IPDIHALENG ESVSQSMLNA ADQNKVRKLG VARGRRYRGV RQRRSGKFTA EIRDPAKKLS  540
RNRVWVGCYE TSEEAALAYD RASLRIHGSK AVLNFPICHI RDCLERASTC PNHRQAQRTG  600
ERGCHSFNNA EIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17500.1	2e-16	ERF family protein