PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g734070.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 248aa MW: 27328.7 Da PI: 9.9327 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 117.5 | 7.8e-37 | 10 | 101 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d++ +++isw+e+g++fvv+++ +fa+++LpkyFkh+nf+SFvRQLn+YgF+k+ ++ weF++++F++g+kell Pd.00g734070.m01 10 FLTKTYQLVDDPSWDDVISWNESGTTFVVWKTVDFARDMLPKYFKHNNFSSFVRQLNTYGFRKTVPDQ---------WEFANDNFRRGQKELL 93 9***************************************************************9998.........**************** PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r+ks Pd.00g734070.m01 94 SEIRRRKS 101 ******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MAQRSVPAPF LTKTYQLVDD PSWDDVISWN ESGTTFVVWK TVDFARDMLP KYFKHNNFSS 60 FVRQLNTYGF RKTVPDQWEF ANDNFRRGQK ELLSEIRRRK SVTAGPGKAT ASEKSGGPST 120 PSNSGEEMAS TSTSSPDSKN PGSVETAAMG QASDLSGENE KLKKENENLS SELAQTKKQC 180 EELVGKQKEG LKLFGVWVKG DEKKKSKRTE RDEKFGVGVG VGVGGTYAKK MKSAEFGAPM 240 VKSGKVCN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36990.1 | 3e-71 | HSF family protein |