PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g732500.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 339aa    MW: 37998.7 Da    PI: 8.0907
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g732500.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.16.5e-161360148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg W++eEde+l + ++  G g+W++++++ g+ R++k+c++rw +yl
  Pd.00g732500.m01 13 RGLWSPEEDEKLMKHITTRGHGSWSSVPKHAGLQRCGKSCRLRWINYL 60
                      788*******************************************97 PP
2Myb_DNA-binding57.53e-1866109146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg++T+eE+++++d+++ lG++ W+ Ia++++ gRt++++k++w++
  Pd.00g732500.m01  66 RGSFTPEEEQIIIDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109
                       89********************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MGHRCCGKQK VKRGLWSPEE DEKLMKHITT RGHGSWSSVP KHAGLQRCGK SCRLRWINYL  60
RPELKRGSFT PEEEQIIIDV HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLMSQGL  120
DPKTHNLISS HQRSSNKIGG SSRSQPHNQQ KPISVNFTTV NSQKKNCSAE LNSSSSPIVT  180
LYNAQQPPMV QTMATPPTYQ YHDDQNPNAA WTSVKDPTFH EPSAESTLNI SSSSSSSSMN  240
LSVFGLLDNS NCLYAAGAQP FEAPRILLAG EQSKGSEEVL QQEKEKLLEM EMFKAIDQDM  300
DASLMESSSF DFSFLESTLM STGVTSHDLN SMADFAWNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12720.11e-86MYB family protein