PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g731840.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 640aa    MW: 71042.7 Da    PI: 6.7233
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g731840.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.94.6e-202579256
                      T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                      +k +++t+eq+++LeelF+++ +p+ ++r++L+++lgL+ rq+k+WFqN+R++ k
  Pd.00g731840.m01 25 KKYHRHTSEQIQRLEELFKECAHPDDNKRQQLSRELGLEPRQIKFWFQNKRTQTK 79
                      78999***********************************************998 PP
2START137.71.2e-431603813206
                       HHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
             START   3 aeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                       a +a +el+k  + +ep+W ks+      +n+d + ++f++ +       ++e +++sgvv   ++ lv ++ld++ +W   ++     a+t+
  Pd.00g731840.m01 160 AASAIEELLKSFEINEPLWIKSPgdgrYLLNRDSYDKIFPRPNHfksssARVESSKDSGVVSISAEHLVDIFLDSS-KWEDLFPtiitNAKTI 251
                       567899*****************998878999999999988666899999**************************.**999999999***** PP

                       EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE CS
             START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwve 168
                       +v++sg      g lqlm+ ++  lsplv  Rdf+f+R+++q + g+wvivdvS d +++   s+   R+ +lpSg++i+++ ng skvtw+e
  Pd.00g731840.m01 252 QVLESGmvgnhsGRLQLMYEQMHILSPLVLsRDFYFLRHCQQIEIGTWVIVDVSYDFPKET--SACQTRSWRLPSGCMIKDMHNGCSKVTWIE 342
                       *****************************99***************************996..579999999********************* PP

                       -EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
             START 169 hvdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                       hv++++++  h l+r l+ s +a ga +w  tlqr ce+
  Pd.00g731840.m01 343 HVEVDDKTQtHRLYRDLICSNVAYGAERWIVTLQRMCER 381
                       ******9998***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 640 aa     Download sequence    
MELPKGNAGV SGDEQEPSSS RRGNKKYHRH TSEQIQRLEE LFKECAHPDD NKRQQLSREL  60
GLEPRQIKFW FQNKRTQTKH DKVASLLSKY IGKPISHIDS LASAAGSSFD FSPGNSMNQG  120
MGSPPLSLNP SNPAVANNAA LAYQLKEIPE MEKTHMADTA ASAIEELLKS FEINEPLWIK  180
SPGDGRYLLN RDSYDKIFPR PNHFKSSSAR VESSKDSGVV SISAEHLVDI FLDSSKWEDL  240
FPTIITNAKT IQVLESGMVG NHSGRLQLMY EQMHILSPLV LSRDFYFLRH CQQIEIGTWV  300
IVDVSYDFPK ETSACQTRSW RLPSGCMIKD MHNGCSKVTW IEHVEVDDKT QTHRLYRDLI  360
CSNVAYGAER WIVTLQRMCE RFDYSMDEVA PSCEFGGVIT TPEGRRSTMK LSHRMVKNFC  420
GMLSMAGKLD FPQLSEVHNS GVRVSVRKNT EPGQPNGMVV SVATSLWLPL PSQNVFNFFR  480
DEETRLQWDV LCNGNPVHEV TRISTGTHPG NCISIIRPFI PTENNMVMLQ ESYIDSLGAL  540
VIYAPVDIPA LNIAVCGEDS SKIPILPSGF VISGDGHPET GPAASNGRSG GSLLTVAFQI  600
LVSCPTSSKQ LNMESVATVN TLISSTVQKI KAALNCSGLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17920.11e-172HD-ZIP family protein