PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g730180.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 235aa MW: 26737.5 Da PI: 9.8649 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.8 | 1.6e-15 | 108 | 150 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+ ++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+ Pd.00g730180.m01 108 RGNISPEEEDLIIRMHKLLGNK-WSLIAGRLP-GRTDNEIKNFWN 150 7899******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MEGGLLLDVV VSEGAAILKL LASKDQPLLV FRFAFAFFNN EGAWHRKAPS FIRPIADLMT 60 VRLKPQPNGT APRVKIDSFP WQARQGLNRS GKSCRLRWLN YLRPDVKRGN ISPEEEDLII 120 RMHKLLGNKW SLIAGRLPGR TDNEIKNFWN INLSRRVLEE GRSPNNQRGI KTFNCTKASP 180 MIPSHDDHDH DQMVENAADA TLPGSVRKDH ENSFLRDLDN FINDLLRDSG INGEY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 1e-39 | MYB family protein |