PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g729910.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 236aa MW: 25819.4 Da PI: 8.2074 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.3 | 2.1e-11 | 79 | 126 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RRdr+N++f eL ++l + + +K +Ka+iL Av+ +++L Pd.00g729910.m01 79 SKACREKLRRDRLNDKFLELGSILEPG---RPPKTDKAAILVDAVRMVNQL 126 5678**********************8...89***************9999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MVSPENTNWL FDYGLIDDTP VLDGNFPVSS SGFTWPVQPL AGSSSVSVEI DGSLGDVEGV 60 KESGSKKRVR TESCSGSSSK ACREKLRRDR LNDKFLELGS ILEPGRPPKT DKAAILVDAV 120 RMVNQLRGEA QKLKDSNSSL QEKIKELKAE KNELRDEKQR LKLEKEKLEQ QLKAMNAQPG 180 FLPPPPAIPA AFAAQGQAHG NKLVPFIGYP GVAMWQFMPP ASVDTSQDHV LRPPVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 1e-90 | bHLH family protein |