PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g728070.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 483aa MW: 53897.7 Da PI: 5.4998 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 110.7 | 1e-34 | 16 | 106 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl k+y++++d++++e++sws+n++sfvv+++ efa+ +Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F +++k+ll Pd.00g728070.m01 16 FLLKTYDMVDDSATDEIVSWSTNKKSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPER---------WEFANEDFIQDQKQLL 99 9****************************************************************999.........**************** PP XXXXXXX CS HSF_DNA-bind 95 ekikrkk 101 ++i+r+k Pd.00g728070.m01 100 KNIHRRK 106 *****98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 483 aa Download sequence |
MEGASTAGGG GGPAPFLLKT YDMVDDSATD EIVSWSTNKK SFVVWNPPEF ARLLLPTYFK 60 HNNFSSFIRQ LNTYGFRKID PERWEFANED FIQDQKQLLK NIHRRKPIHS HSNPQGSMVD 120 PERAALDDEI EKLSHDKATL EANISRFKQQ RSDAKLQLED LTQRVNSMEQ RQKDLLKFLD 180 KNVQNPTFVE HLTRKIEAMD FSACNKKRRL PDVDHLQPVV ENSFVDNQSS SRSEFGNIFH 240 QDFSSKLRLE LSPAVSDINL VSRSTQSSNE DGYSPTRKIS EELKGVQKGT EGLLFAPETL 300 ELSDTGTSFA FKMDSLLSQK VLTVGNPRLH SLQPGLSSNE EGDGHISCQL KLTLASSPLQ 360 VNSSPHSATI PQVGQDISKS LASGLNANGK ESDIRAFTNK NPADEDVHKT CSLEATNNNQ 420 GPPPAPARVN DVFWEQFLTE RPGCSENEEA SSNYRGNPYD EQDDGRLGHG MSRSAKDAET 480 LTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13980.1 | 1e-169 | HSF family protein |