PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g726460.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 300aa    MW: 34326.1 Da    PI: 5.59
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g726460.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix47.64.5e-1566150286
          trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmre.rgferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       Wt++e+ +L++a  ++  + ++++l+   W+ev++k++e  ++er+ +qC+++++ l+k+ykk++    + t +++s+++yf++++
  Pd.00g726460.m01  66 WTEHETFVLLDAWGDRFLQRGKKSLRSEEWQEVAEKVSEvSKIERTDTQCRNRLDTLKKKYKKERLKFAE-TGGATSKWVYFKKMD 150
                       *************************************762678**********************99998.688999********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MDDTEDDARY PPNPYGVNHQ QGYGSSQRQK LPVRSGPYSR PVGTPPAAAP SAPRQSIGGR  60
NSLTDWTEHE TFVLLDAWGD RFLQRGKKSL RSEEWQEVAE KVSEVSKIER TDTQCRNRLD  120
TLKKKYKKER LKFAETGGAT SKWVYFKKMD MLMSSPQQQS GLSCGLDSGE YVFMNPRVYL  180
NRANGLDEMR DSPGNSESAE GVDDDSDGLP PKKRRYGRDN DDRCSFRLLA DSIQKFSDIY  240
EKIETSKRQQ MVELEKMRMD FHRDLEMQKR QIMERAQAEI AKIQQGDDEE NDISAENASG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.11e-76Trihelix family protein