PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g722990.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 491aa MW: 53550.8 Da PI: 6.9375 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 51.7 | 1.5e-16 | 329 | 375 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+ksLq Pd.00g722990.m01 329 VHNLSERRRRDRINEKMRALQELIPHS-----NKTDKASMLDEAIEYLKSLQ 375 6*************************7.....5******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 491 aa Download sequence |
MGPDHELVEL LWRNGQVVLH SQTHRKPSPN PPNEARQVQK QDQQTIRVGG LYGNSSNLTQ 60 DEDTGSLIHY PLEDSFAKEF CSHFFCELPS CDPIEIDKPT KQFEEEKFAK FGASDTPHLV 120 STAPQPNVKS PAGMGYPANP MPPPRYQYKN STEQNQNLGG LGKVVNFSTF ATPGKGDRGS 180 SRGTIGGKES GNLTQGEVKE CSVMTVGSSY VGSNQVLNDL DVSRASSNCD GTTGLSVGPF 240 YDNVQKMMPQ SETGKTDTLD PTLTSSSGGS GSSFGRGGKR SNVVNSNKRK GRDAEDSECQ 300 SEAAELESAA GNKSAQRSGS SRRSRAAEVH NLSERRRRDR INEKMRALQE LIPHSNKTDK 360 ASMLDEAIEY LKSLQMQLQV MWMGSGMAPM IVPLVDQCMN VAPATNQAVM CQAPVLNPVD 420 YHNQMQNPAF QEQYARLMGF HHMQTMSQPM NMFRFGSQPM QQNQMIAPTG INSGHLGGGV 480 TANDTLSGKM C |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 334 | 339 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43010.2 | 2e-48 | bHLH family protein |