PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g721180.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 236aa    MW: 25394.6 Da    PI: 9.3187
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g721180.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.82.7e-391473362
            zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                      e alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+
  Pd.00g721180.m01 14 EPALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 73
                      6789*****************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MADRARMANI PLPEPALKCP RCESTNTKFC YFNNYSLTQP RHFCKTCRRY WTRGGALRNV  60
PVGGGCRRNK RSKGSSSSAS KSPVSSSDRP TGSPGSSGQA NIGLNNTAST ADNNIMMSPQ  120
IPPLRFMSPF ATDMALNYGM NVNNYGGGGG VGDMNSFHQM GGGLGSIGGS LFNFQQQTPS  180
FPFLTAGGGL DPSPAAAGMM FENSGVEVTG YNQICPVNEM KEDWERWPMG FVRRES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.13e-38Dof family protein