PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g720960.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 546aa MW: 60155.6 Da PI: 5.9399

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g720960.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	64.9	1.5e-20	114	167	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r +W + L e+F+ a++++ G ++AtPk+ile+m+ ++Lt+++v+SHLQkYR+ Pd.00g720960.m01 114 KKRCEWKKSLGEKFMLAITHI-GLDNATPKRILEFMNEPDLTIKNVASHLQKYRI 167 689****************.******************************7 PP
2	Myb_DNA-binding	21.7	4.7e-07	116	166	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W + + e++ a++ G + t+k+I + m+ +t k++ s++qky+ Pd.00g720960.m01 116 RCEWKKSLGEKFMLAITHIGLDnaTPKRILEFMNePDLTIKNVASHLQKYR 166 568999********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MASKSVLIVA LLFSVLILCL QGTYADSIQG WGHARFYGGA GAFASGAIGG GFGNGNWDSQ 60 GYGFSSGSCY ELKCDSGPIW CLTGDEEKQE KRAKRGRKRS REGDDEERTA APRKKRCEWK 120 KSLGEKFMLA ITHIGLDNAT PKRILEFMNE PDLTIKNVAS HLQKYRIYLK QLKVGVAGDE 180 DMRERLRRSS FALGHLELFF NNNERDQHHS QLLKQQKMGT SIGSTFQPSA GIGSTLPLTA 240 AASNSHGSIQ FSNDQQSSTS NSSRSIPQLI GSGQSSLLNN NPANFLRQQP TLGNRIRDQL 300 FCQENRLAAF GMQQPSNNFE NGGMSFDPMN NVGLTNNNIG TKNLMQVYPL QSQPGTNNPF 360 SYNLATSVNQ NGLNFTPMSS SFDNLGSHFN DVNQFGVYWQ SSCAAVFETG ASSAYQFPPN 420 LRNSKGDLDQ QQNIPVLPPP EGNINDQYGL PNINVGGGNV ENSNRYIHDI FMMPDYLFTD 480 EQDNYHQPPS QQQDGGHDQL PYQVEMQDPA ANQVPNLSAD QVPNPGPYHV EDNAPNETIS 540 ELLSLN

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MASKSVLIVA LLFSVLILCL QGTYADSIQG WGHARFYGGA GAFASGAIGG GFGNGNWDSQ  60
GYGFSSGSCY ELKCDSGPIW CLTGDEEKQE KRAKRGRKRS REGDDEERTA APRKKRCEWK  120
KSLGEKFMLA ITHIGLDNAT PKRILEFMNE PDLTIKNVAS HLQKYRIYLK QLKVGVAGDE  180
DMRERLRRSS FALGHLELFF NNNERDQHHS QLLKQQKMGT SIGSTFQPSA GIGSTLPLTA  240
AASNSHGSIQ FSNDQQSSTS NSSRSIPQLI GSGQSSLLNN NPANFLRQQP TLGNRIRDQL  300
FCQENRLAAF GMQQPSNNFE NGGMSFDPMN NVGLTNNNIG TKNLMQVYPL QSQPGTNNPF  360
SYNLATSVNQ NGLNFTPMSS SFDNLGSHFN DVNQFGVYWQ SSCAAVFETG ASSAYQFPPN  420
LRNSKGDLDQ QQNIPVLPPP EGNINDQYGL PNINVGGGNV ENSNRYIHDI FMMPDYLFTD  480
EQDNYHQPPS QQQDGGHDQL PYQVEMQDPA ANQVPNLSAD QVPNPGPYHV EDNAPNETIS  540
ELLSLN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	116	RKRSREGDDEERTAAPRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-19	ARR-B family protein