PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g720760.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | SBP | ||||||||
Protein Properties | Length: 360aa MW: 38946.4 Da PI: 9.9134 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 139 | 1.4e-43 | 58 | 135 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++dls+ak y++rhkvC vhsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+q+ Pd.00g720760.m01 58 RCQVEGCQVDLSDAKAYYSRHKVCGVHSKTPMVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPQP 135 6**************************************************************************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 360 aa Download sequence |
MGHCQSLNGL KFGRKIYFED AGLGAPYKSG SAGSSSSGAT PPKKQRGVNL AQPGQPPRCQ 60 VEGCQVDLSD AKAYYSRHKV CGVHSKTPMV IVAGLEQRFC QQCSRFHQLP EFDQGKRSCR 120 RRLAGHNERR RKPQPGSILS GRFGRLSSSI YENSSRVGSF LIDFTAYPRH SGRDAWATTR 180 TSERVPGNQN SNDTGKFLQH PWQSNSEITP SGLYLQGSAG GTSYPGPGIP PGECVTGVTD 240 SSCALSLLSS QPWGSRNRVL GVGMNTVINT QGPPVGQPIT HAGTSNHFPT TSWGFKGNAG 300 SSSHEMLPDL GLGQMSQPPL STQYSGVLEL SQQSSRRQQQ MELGHTRGYD TSSQHIHWSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G42200.1 | 2e-69 | SBP family protein |