PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g720650.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 1032aa MW: 114998 Da PI: 6.1351

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g720650.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.2	5.9e-32	114	170	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++k+s++prsYYrCt ++C++kk+vers+edp++++itYeg H h Pd.00g720650.m01 114 DDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSSEDPDTLIITYEGLHLH 170 8******************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 1032 aa Download sequence
MEYAMGATWS DGSEEELVRE LLDNETPFFV LPEEALQSQM SVSNEDSVVN RFIPTVYSGP 60 TIKDIETALS VTTGAIQPQE LSPARLSMLE RGLSKVEHKY TLKIKSCDNG AMADDGYKWR 120 KYGQKSIKNS PNPRSYYRCT NPRCSAKKQV ERSSEDPDTL IITYEGLHLH FAYPFFPLNN 180 QALNTSPPMK KPRNKTSQPH AEDREHEAQE SPRSITPDPD PDLQPGAFPD PHEEFVEKEP 240 SAQGLLQDVV PFMIRNPNPS SASSNSSCSS YRSSPTSPSS LSWATSYFDN VISGTYNGRT 300 TFLHETVPLG NACISGVDGE LGLLRGYLTY NGAGKQLVSN TYLSNFKSFL TNPRIRRFFS 360 SQGHEKKNYE NYYPKNKKEI PKGNGQKSGS KEGSNAGDQG NTWELFIPWH QIIGPIMFLG 420 FVFTSLLLNP QQAKEISFQE FKNKLLEPGL VDHIEVANKS VAKVYVRSSP HDKKQSGDDA 480 VKGPADGSSS GGNTTQYKYY FNIGSVESFE EKLEEAQEAL GFDRHDFVPV IYVSQINWFQ 540 ELMRYGPMAL LLGALWFMSR KMPSIGGPGG KGGRGIFNIG KAQITKLDKN AKNKVFFKDV 600 AGCDEAKQEI MEFVHFLKNP KKYEEVRSLF QEARQCAPSI IFIDEIDAIG RARGRGGFSG 660 GHDERESTLN QLLVEMDGFG TTAGVVVLAG TNRPDILDKA LLRPGRFDRQ ITIDKPDIKG 720 RNQIFQIYLN KLKLDLEPSY YSERLAALTP GFAGADIANV CNEAALIAAR NESPKITMKH 780 FEAAIDRVIG GLEKKNKVVS KLERRTVAYH ESGHAVAGWF LEHAEPLLKV TIVPRGTAAL 840 GFAQYVPNEN LLMTKEQLFD MTCMTLGGRA AEQVLLGKIS TGAQNDLEKV TKMTYAQVAV 900 YGFSDKVGLL SFPQRDDAFE MAKPYSSKTG AIIDSEVREW VAKAYVRTIE LIEEHKEQVG 960 QIAELLLEKE VLHQDDLVRV LGERPFKSNE PTNYDRFKEG FQEEDKEPKE TTEGGNVDDG 1020 RSPPIQPDVV PA

Sequence ? help Back to Top

Protein Sequence Length: 1032 aa Download sequence

MEYAMGATWS DGSEEELVRE LLDNETPFFV LPEEALQSQM SVSNEDSVVN RFIPTVYSGP  60
TIKDIETALS VTTGAIQPQE LSPARLSMLE RGLSKVEHKY TLKIKSCDNG AMADDGYKWR  120
KYGQKSIKNS PNPRSYYRCT NPRCSAKKQV ERSSEDPDTL IITYEGLHLH FAYPFFPLNN  180
QALNTSPPMK KPRNKTSQPH AEDREHEAQE SPRSITPDPD PDLQPGAFPD PHEEFVEKEP  240
SAQGLLQDVV PFMIRNPNPS SASSNSSCSS YRSSPTSPSS LSWATSYFDN VISGTYNGRT  300
TFLHETVPLG NACISGVDGE LGLLRGYLTY NGAGKQLVSN TYLSNFKSFL TNPRIRRFFS  360
SQGHEKKNYE NYYPKNKKEI PKGNGQKSGS KEGSNAGDQG NTWELFIPWH QIIGPIMFLG  420
FVFTSLLLNP QQAKEISFQE FKNKLLEPGL VDHIEVANKS VAKVYVRSSP HDKKQSGDDA  480
VKGPADGSSS GGNTTQYKYY FNIGSVESFE EKLEEAQEAL GFDRHDFVPV IYVSQINWFQ  540
ELMRYGPMAL LLGALWFMSR KMPSIGGPGG KGGRGIFNIG KAQITKLDKN AKNKVFFKDV  600
AGCDEAKQEI MEFVHFLKNP KKYEEVRSLF QEARQCAPSI IFIDEIDAIG RARGRGGFSG  660
GHDERESTLN QLLVEMDGFG TTAGVVVLAG TNRPDILDKA LLRPGRFDRQ ITIDKPDIKG  720
RNQIFQIYLN KLKLDLEPSY YSERLAALTP GFAGADIANV CNEAALIAAR NESPKITMKH  780
FEAAIDRVIG GLEKKNKVVS KLERRTVAYH ESGHAVAGWF LEHAEPLLKV TIVPRGTAAL  840
GFAQYVPNEN LLMTKEQLFD MTCMTLGGRA AEQVLLGKIS TGAQNDLEKV TKMTYAQVAV  900
YGFSDKVGLL SFPQRDDAFE MAKPYSSKTG AIIDSEVREW VAKAYVRTIE LIEEHKEQVG  960
QIAELLLEKE VLHQDDLVRV LGERPFKSNE PTNYDRFKEG FQEEDKEPKE TTEGGNVDDG  1020
RSPPIQPDVV PA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43290.1	2e-51	WRKY family protein