PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g719230.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 386aa    MW: 42774.5 Da    PI: 6.0495
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g719230.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS419.52.8e-128143732374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lLl+cAeavs++++ +a+++L ++sel++p g++ qR+aayf eA++arl++s+ ++y++lpps  + +++++ ++a+++f+ +sP++kfs
  Pd.00g719230.m01  14 LTLLLQCAEAVSADNFDEATKILLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYASLPPSYVPISHTQKMVSAFQVFNGISPFVKFS 106
                       579****************************************************************************************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                       h+taNqaI ea+e+e+rvHi+D+di+qGlQWp L++ LasRp+gpp +R+Tg+g     s e+le+tg+rL++fA++lg+pfef + va+++ 
  Pd.00g719230.m01 107 HFTANQAIQEAFEREDRVHIVDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGT----SMEALEATGKRLSDFADKLGLPFEFFP-VAEKVG 194
                       *******************************************************....***************************.7***** PP

              GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklprese 280
                       +l++e+L+++++Ea+aV++    h+l+d ++s ++    +L+l+++l Pkvv+vveq+++h ++sFl rf+ea++yysalfdsl a++++ese
  Pd.00g719230.m01 195 SLDPERLNISKREAVAVHWLQ--HSLYDVTGSDSN----TLWLLQRLAPKVVTVVEQDLSH-AGSFLGRFVEAIHYYSALFDSLGASYGEESE 280
                       ********************9..999999999999....**********************.899**************************** PP

              GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                       er++vE++ll+rei+nv+a  g +r  + + +++Wre+++++GF+ ++l  +aa+qa lll +++sdgy++ e++g+l lgWkd  L+++SaW
  Pd.00g719230.m01 281 ERHVVEQQLLSREIRNVLAVGGPSRSGEVK-FHNWREKFQQSGFRGISLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAW 372
                       ************************888776.************************************************************** PP

              GRAS 374 r 374
                       r
  Pd.00g719230.m01 373 R 373
                       8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MRQQKRDEEG LHLLTLLLQC AEAVSADNFD EATKILLEIS ELSTPFGTSA QRVAAYFSEA  60
MSARLVSSCL GIYASLPPSY VPISHTQKMV SAFQVFNGIS PFVKFSHFTA NQAIQEAFER  120
EDRVHIVDLD IMQGLQWPGL FHILASRPGG PPYVRLTGLG TSMEALEATG KRLSDFADKL  180
GLPFEFFPVA EKVGSLDPER LNISKREAVA VHWLQHSLYD VTGSDSNTLW LLQRLAPKVV  240
TVVEQDLSHA GSFLGRFVEA IHYYSALFDS LGASYGEESE ERHVVEQQLL SREIRNVLAV  300
GGPSRSGEVK FHNWREKFQQ SGFRGISLAG NAATQATLLL GMFPSDGYTL VEDNGTLKLG  360
WKDLCLLTAS AWRPPFHATT NPNLHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein