PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g718550.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 732aa MW: 82074.7 Da PI: 6.5327

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g718550.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12	0.00038	561	598	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ Lq Pd.00g718550.m01 561 RQLIQDRIKELRELIPNgA------KCSIDSLLERTIKHMLFLQ 598 77899************77......7777779999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 732 aa Download sequence
MNSVRRFFEV PRLFRKKLWT LEEMGTSDLH HVLRSLCFNT EWNYAIFWKL KYRARMVLTW 60 EDAYYDNCEQ HDSSENRCFN KTLDRLHDSH YSHDPLGLAV AKMSYHVYTL GEGIVGQVAV 120 TRKHQWIFAD NLFKNNCSPF QHCDGWQSQF SAGIRTIVVV AVPHGVVQLG SLNKVSENVK 180 LVSEIRDVFS TLQDSPVEQI HKVANREESP DVWSSVFPHI GKDSDSSYVF PLPENCLKKA 240 VELANKHGGL ESSNLGCLES AKLHQSKSSI LNSEHSKLVG VELLDRTKCK GESSGCKDTR 300 MASTIYANPL SHGSVQENVN LCDSADLSAT FLNSAAHGRI NVDRVDFYQN EVLQVSEPSD 360 VKFQKDLENL DFQTESGHMD TSSTSMAFPA GCELHEALGS AFLNKGNYFD WEAEKNGDGI 420 TIEMPEGMKI GQLTSDSCQE HLLEAVVANV CQSGNDVKSE KSFCKSMQSL LTTEKYPEPS 480 SHTTHTIDSE NYSIDQPSLI AENTQQCLSS SGVCGVISPK WFSSPCPSAC SEQLERSSGP 540 SKNNKKRARP GENSRPRPRD RQLIQDRIKE LRELIPNGAK CSIDSLLERT IKHMLFLQSI 600 TKHADKLNKC ADAKLCHKEA SMLGSSNYER GSSWAVEVGG NLKVCSIMVE NLNKNGQMVV 660 EMMCEECSHF LEIAEAIRSL GLTILKGVTE ARSDKTWICF VVEGQNNRSI HRMDILWSLV 720 QILQPKNPMQ QL

Sequence ? help Back to Top

Protein Sequence Length: 732 aa Download sequence

MNSVRRFFEV PRLFRKKLWT LEEMGTSDLH HVLRSLCFNT EWNYAIFWKL KYRARMVLTW  60
EDAYYDNCEQ HDSSENRCFN KTLDRLHDSH YSHDPLGLAV AKMSYHVYTL GEGIVGQVAV  120
TRKHQWIFAD NLFKNNCSPF QHCDGWQSQF SAGIRTIVVV AVPHGVVQLG SLNKVSENVK  180
LVSEIRDVFS TLQDSPVEQI HKVANREESP DVWSSVFPHI GKDSDSSYVF PLPENCLKKA  240
VELANKHGGL ESSNLGCLES AKLHQSKSSI LNSEHSKLVG VELLDRTKCK GESSGCKDTR  300
MASTIYANPL SHGSVQENVN LCDSADLSAT FLNSAAHGRI NVDRVDFYQN EVLQVSEPSD  360
VKFQKDLENL DFQTESGHMD TSSTSMAFPA GCELHEALGS AFLNKGNYFD WEAEKNGDGI  420
TIEMPEGMKI GQLTSDSCQE HLLEAVVANV CQSGNDVKSE KSFCKSMQSL LTTEKYPEPS  480
SHTTHTIDSE NYSIDQPSLI AENTQQCLSS SGVCGVISPK WFSSPCPSAC SEQLERSSGP  540
SKNNKKRARP GENSRPRPRD RQLIQDRIKE LRELIPNGAK CSIDSLLERT IKHMLFLQSI  600
TKHADKLNKC ADAKLCHKEA SMLGSSNYER GSSWAVEVGG NLKVCSIMVE NLNKNGQMVV  660
EMMCEECSHF LEIAEAIRSL GLTILKGVTE ARSDKTWICF VVEGQNNRSI HRMDILWSLV  720
QILQPKNPMQ QL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	0.0	bHLH family protein