PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g718460.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 376aa    MW: 42117.3 Da    PI: 6.2633
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g718460.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26065.21.6e-201832432787
            DUF260  27 pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqql 87 
                       + +fa++hk+FGasnv+kll++lp ++r +a+ ++ yeA+ar++dP+yG+v++i++lqqq 
  Pd.00g718460.m01 183 ATHFAAIHKVFGASNVSKLLAQLPVSDRCRAALTISYEAQARVQDPIYGCVSHIFALQQQG 243
                       579*******************************************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MAKNYSKNLF NHLYFMQRFT KKEQLYQRFI YSYVNRFQSL RSKVGKVERE ALKETKTTAP  60
PHAPLRPKHD AISNYSSDDD DLIDSKWKGL ELAWLPRALE PALQLCRWAL PSSTGDGVGE  120
KPPPSTRSVS EIIASIQRSK TGFQDWSLSD LTIGLFLIYL RQASVNPFED VNGVQVSSDS  180
MGATHFAAIH KVFGASNVSK LLAQLPVSDR CRAALTISYE AQARVQDPIY GCVSHIFALQ  240
QQGVSKITTE GEAKSPQRVI SLQAQLASVK EQAAKGFSNA NPIEKYDTNV QSWPQSESSN  300
ILMPQSMNLN NINDSMLPFY SENKNSNSFE GDRNFMIPEV LNDMYGSYGD GEASNSMSSL  360
DMQMSNMQWG FDQDQD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.17e-36LBD family protein