PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g716980.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 242aa MW: 27451.2 Da PI: 9.7345 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.8 | 1.9e-18 | 92 | 146 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk+q + Lee F ++++++ ++++ LA++l+L++rqV vWFqNrRa+ k Pd.00g716980.m01 92 RKKLRLTKDQSTLLEESFSRHSTLNPARKQSLAEQLNLQQRQVEVWFQNRRARTK 146 678899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 112.3 | 3e-36 | 92 | 180 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+k+q++lLEesF+++++L+p rK++la++L+lq+rqv+vWFqnrRARtk+kq+E+d+e+ k+++ +l +en+rL+ke +eL+ + Pd.00g716980.m01 92 RKKLRLTKDQSTLLEESFSRHSTLNPARKQSLAEQLNLQQRQVEVWFQNRRARTKLKQTEVDCEFWKKRCGSLGDENRRLKKELQELK-S 180 69*************************************************************************************9.4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGGGDEEACN TKLALGLGVG EYASRQEMRK KENPLVCLDL SFALCPKQQV ASLGDRMENR 60 SSLRAMDEDE ENERSIGTNN KSIIMNNKNG VRKKLRLTKD QSTLLEESFS RHSTLNPARK 120 QSLAEQLNLQ QRQVEVWFQN RRARTKLKQT EVDCEFWKKR CGSLGDENRR LKKELQELKS 180 LNKNGASPLY IQIPKATMLS MCPSCERMVK AHHHDQAAAK NTEDLNVVRK SNKLQGGFDG 240 TN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 141 | 149 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 4e-53 | HD-ZIP family protein |