PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g716640.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 301aa    MW: 32496 Da    PI: 10.4356
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g716640.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY505.7e-16212240230
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa 30 
                       +D ++WrKYGqK++kgs++pr+YY+C+s 
  Pd.00g716640.m01 212 SDDFSWRKYGQKPIKGSPYPRGYYKCSSV 240
                       69************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MAIDLVGFSR MDDRTAMEEA ASAGLQSMDH LIRVLSNQNP SQTQTQTPLD CREITDLTVS  60
KFKQLISVLN RTGHARFRRG PANQSSTPVQ PVQPKPQTTS SAFSVPKSNN DDSLTLSPPI  120
STTSSFLSSI TIGDGSVSNG KAISSILAPP APAFSAGKPP LSQSHRKRCH DNDVAAKTSS  180
SGRCHCSKRR KSKVKKTIRV PAISSKIADI PSDDFSWRKY GQKPIKGSPY PRGYYKCSSV  240
RGRFCGPCFP VNLKSGPHVA SIMTVESAPC QSGCGTAEDV TVPEQKVKKE KISNVKIKYT  300
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.11e-66WRKY family protein