PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g713140.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 292aa MW: 32422.9 Da PI: 4.9486 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 117 | 1.1e-36 | 10 | 101 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d++ +++isw+e+g++fvv+++ +fa+++LpkyFkh+nf+SFvRQLn+YgF+k+ ++ weF++++F++g+kell Pd.00g713140.m01 10 FLTKTYQLVDDPSWDDVISWNESGTTFVVWKTVDFARDMLPKYFKHNNFSSFVRQLNTYGFRKTVPDQ---------WEFANDNFRRGQKELL 93 9***************************************************************9998.........**************** PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 ++i+r+ks Pd.00g713140.m01 94 SEIRRRKS 101 ******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MAQRSVPAPF LTKTYQLVDD PSWDDVISWN ESGTTFVVWK TVDFARDMLP KYFKHNNFSS 60 FVRQLNTYGF RKTVPDQWEF ANDNFRRGQK ELLSEIRRRK SVTTGPGKAT ASEKSGGPST 120 PSNSGEEMAS TSTSSPDSKN PGSVETAAMG QASDLSGENE KLKKENENLS SELAQTKKQC 180 DELVGFLMDY LKVGPDQINR IMRQGSYVPT RDEDEDDDDD ADDDDDDDGK QKEGLKLFGV 240 WVKGDEKKKS KRTERDEKFG VGVGVGVGGT YAKKMKSAEF GAPMVKSGKV CN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36990.1 | 9e-85 | HSF family protein |