PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g712880.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 534aa MW: 59208.8 Da PI: 7.2358

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g712880.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.5	3.6e-16	283	329	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ E+rRR+riN+++ L+ l+P++ K +Ka++L +A+eY+k+Lq Pd.00g712880.m01 283 VHNMSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 329 6***********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MKRVCGISAD TSNHNDKDHI SALPDDVLHT IVNLLSMRDA IRTSKLSRRN VRYFQRSIEA 60 VLASHSGTKI ESFKVQCCFG NEHPRYFKGW INFAVAKGAE TLEFAFSCDE LSERTDWTTI 120 DYYNFPALLL PISGEGSKLR HLSLRTCKLR ASSVFFSLEA RVIDTGKILL RSSSSLASVV 180 AHTGKAPQFL FSSSPSVAAL PDHLSRPCHS MFLGDGITAV DSSAALLPAG NPNVSSSSFG 240 ASENETDEYD CESEEGLEAL VEEAAGKPGC GRSSSKRSRA AEVHNMSEKR RRSRINEKMK 300 ALQNLIPNSN KTDKASMLDE AIEYLKQLQL QVQMLSMRNG MSLHPMCLPG ALQPVQLSQM 360 RMDLGEENRP LHLDMTGTPL MNQESPTQNL FHFSNQCTDA NQSYVPDMSN VVNSETSFGL 420 ESSMQAHLGP FQLPNSSEEI CREDMLQHQQ INVNRSETNP LEFELGATAR VSLSFNTQVS 480 DPKGSSSLGA CITGRNRQEG LLLKAMKQNF HIDSMRTGRR RVANDNIKTE RRHI

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MKRVCGISAD TSNHNDKDHI SALPDDVLHT IVNLLSMRDA IRTSKLSRRN VRYFQRSIEA  60
VLASHSGTKI ESFKVQCCFG NEHPRYFKGW INFAVAKGAE TLEFAFSCDE LSERTDWTTI  120
DYYNFPALLL PISGEGSKLR HLSLRTCKLR ASSVFFSLEA RVIDTGKILL RSSSSLASVV  180
AHTGKAPQFL FSSSPSVAAL PDHLSRPCHS MFLGDGITAV DSSAALLPAG NPNVSSSSFG  240
ASENETDEYD CESEEGLEAL VEEAAGKPGC GRSSSKRSRA AEVHNMSEKR RRSRINEKMK  300
ALQNLIPNSN KTDKASMLDE AIEYLKQLQL QVQMLSMRNG MSLHPMCLPG ALQPVQLSQM  360
RMDLGEENRP LHLDMTGTPL MNQESPTQNL FHFSNQCTDA NQSYVPDMSN VVNSETSFGL  420
ESSMQAHLGP FQLPNSSEEI CREDMLQHQQ INVNRSETNP LEFELGATAR VSLSFNTQVS  480
DPKGSSSLGA CITGRNRQEG LLLKAMKQNF HIDSMRTGRR RVANDNIKTE RRHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36930.1	1e-55	bHLH family protein