PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g712530.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 262aa MW: 29778.1 Da PI: 6.3591 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.9 | 8.3e-17 | 12 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl Pd.00g712530.m01 12 KGPWSPEEDAKLKEYIEKYGTGgNWIALPQKAGLRRCGKSCRLRWLNYL 60 79*********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MIEIREPANV KKGPWSPEED AKLKEYIEKY GTGGNWIALP QKAGLRRCGK SCRLRWLNYL 60 RPNIKHGEFS DEEDRIICNL FTNIGSRWSI IAAQGSNNST AYYAQTRSFS SALEPISFSP 120 SLLSRSSTNA ASVLHQVHQE RFVGRAMQHN YQVKDNILMF GGEASCSSSD GSCSNQISQC 180 RDREYEYNYN FFNGGEGHQK IMLPDGLNGW RSEKQNGNGI WEDQAPLDYG LEEIKQLISS 240 TSSCNNFLFD ENKTEEKAMM YY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65790.1 | 3e-52 | MYB family protein |