PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g707760.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 300aa MW: 33399.8 Da PI: 9.9302 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 48 | 2.2e-15 | 126 | 172 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRdriN+++ L++l+P+a K +Ka++L ++++Y+ +Lq Pd.00g707760.m01 126 VHNQSERKRRDRINQKMKALQRLVPNA-----SKTDKASMLDEVIKYLEQLQ 172 6*************************9.....7******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MQQNHPNTSR LVPLSNYDIR ELKLENGQLA MHGLGGLLPT SQAKHTWGRA GDTLESVVHQ 60 ATHHKREPNL IHNGQTPANI SSMVASSGRT WTDEGGQENQ DDGQETTKDG ESGRSRSTRP 120 KRAAAVHNQS ERKRRDRINQ KMKALQRLVP NASKTDKASM LDEVIKYLEQ LQAQVQMMSS 180 VRNMPHMNMN MNMMMPLGMQ QQQHLHQMSF LAHMGMGAPT FIPPFMVPPL MPRHPPSQAK 240 PDPACTNASD PLPDPYGALL AQQSMNMDLF NRMAALYHQQ VNHTTAATSS PSQSNHVQGN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 131 | 136 | ERKRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00050.1 | 4e-39 | bHLH family protein |