PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g707670.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 410aa MW: 43841.4 Da PI: 9.1336 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.6 | 0.00041 | 123 | 142 | 2 | 21 |
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C C+ s+s+k+n++ Hi Pd.00g707670.m01 123 RCDVCNISCSSKENYEAHIL 142 6*****************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 410 aa Download sequence |
MFNPSQDSTN FTYHIPYQSN TINPNSNQRW LFPPPVVPSA VAFDPALRPP GTEPNANSGS 60 YSWTHVVFQA QTPFGEDPNA GSQNRAIQQA EPIGHEASIK SLNESLLVPT TSNSLWNSNG 120 TNRCDVCNIS CSSKENYEAH ILGKKHQKKI RMQYNPTAAA SNVLNNISLP SQTSSVGGQV 180 IFGGSGVAAG AELETKRRKV VNGGAAVDSM VVCTICKVVC NSQEVYIKHL AGKRHKAQAS 240 LVAPNVGPYF GAVQSEVPGI WSKDPNKIKL VQYAWCEVCK VNCNSNDTYI KHLVGKKHQK 300 NLEQLEKLKN DGSASTSNVP SAVTNAIIGP MENPGAKGSQ SEEDLETKKR KIISGGAAAG 360 AVKTCTVCNV VCNSQTVFSS HLAGQKHAAM VKKQAEVGVA IRASQQITAS |