PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g707650.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 792aa MW: 89087.3 Da PI: 4.4001

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g707650.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.8	2.1e-07	526	574	2	47
SSS-HHHHHHHHHHH....HHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdav....kqlGggtWktIartmgkgRtlkqcksrwqky 47 +rW++eE++l+ ++v + lG++ W+ + ++ Rt k+++s+++++ Pd.00g707650.m01 526 QRWSEEEEQLFHQVVfsnpASLGKNFWDNLSTIFP-SRTKKEIVSYYFNV 574 79***********4444455666******.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 792 aa Download sequence
MGCNSSKSVD SKANRAARWR STGIVASQSF PHEILDLDRS VRTLDLTHNK IVDIPMEISK 60 LVNLQRLVLA HNLIDRLPIN LAKLESLKVM TLDANRVTSL PDELGQLVRL EQLSISGNSL 120 QYLPETIGSL RNLKLLNVSN NKLKSLPESI GSCFSLEELQ ADDNSIEDLP ESVCNLVHLK 180 ALCLNNNNVK QIPTNLLKDC KALQNISLHG NPISMDQFQQ MEGFQEFEAR RKKKFDKQID 240 SNVMISSKGL DEGWEKVRFI EVKQFCPLVA FRIELLSSNS AICFISRRLF FEFNMVQKRP 300 LDDEQIFVSF KHPRQVGHSK ELVSFSESVF PEDVSKKPQT LGGEDVETSA PGSFTISSWT 360 TSSTSEEDSL LEAPFHGSFP DCFNPERPIR TLAQSEDIYS FLLDHPPRKS VSIGPEHQAD 420 VPLWDAQGTN NNSNNLDTSE AVSNSDLEDE KRLMGTCVIP MPDSDLSADT GCIVGIGRTD 480 CSCEDEDSVR CVRQHISEAR EKLIKTIGPK RFEELGFSDM GEQVAQRWSE EEEQLFHQVV 540 FSNPASLGKN FWDNLSTIFP SRTKKEIVSY YFNVFMLVKR AGQNRYDPIN VDSDNDEWQG 600 SNDYGDNQLA VTEDEDSVVE SPICQNVPGY YQSWKDNLQE YDEEVVDDTC DDNVNVDVFG 660 GGTKQILDRC YGLVDNCSTC PIAQLQDKIS WDEKGDQEVQ DDSCTSFDAA AASQENQLKS 720 EEGNHWSGGF NGSSNRGDHE YVLEPCDTKI WDAGYMTCPE NKVDFLPTCN MIEEVFGKES 780 WNYKARDGKN LG

Sequence ? help Back to Top

Protein Sequence Length: 792 aa Download sequence

MGCNSSKSVD SKANRAARWR STGIVASQSF PHEILDLDRS VRTLDLTHNK IVDIPMEISK  60
LVNLQRLVLA HNLIDRLPIN LAKLESLKVM TLDANRVTSL PDELGQLVRL EQLSISGNSL  120
QYLPETIGSL RNLKLLNVSN NKLKSLPESI GSCFSLEELQ ADDNSIEDLP ESVCNLVHLK  180
ALCLNNNNVK QIPTNLLKDC KALQNISLHG NPISMDQFQQ MEGFQEFEAR RKKKFDKQID  240
SNVMISSKGL DEGWEKVRFI EVKQFCPLVA FRIELLSSNS AICFISRRLF FEFNMVQKRP  300
LDDEQIFVSF KHPRQVGHSK ELVSFSESVF PEDVSKKPQT LGGEDVETSA PGSFTISSWT  360
TSSTSEEDSL LEAPFHGSFP DCFNPERPIR TLAQSEDIYS FLLDHPPRKS VSIGPEHQAD  420
VPLWDAQGTN NNSNNLDTSE AVSNSDLEDE KRLMGTCVIP MPDSDLSADT GCIVGIGRTD  480
CSCEDEDSVR CVRQHISEAR EKLIKTIGPK RFEELGFSDM GEQVAQRWSE EEEQLFHQVV  540
FSNPASLGKN FWDNLSTIFP SRTKKEIVSY YFNVFMLVKR AGQNRYDPIN VDSDNDEWQG  600
SNDYGDNQLA VTEDEDSVVE SPICQNVPGY YQSWKDNLQE YDEEVVDDTC DDNVNVDVFG  660
GGTKQILDRC YGLVDNCSTC PIAQLQDKIS WDEKGDQEVQ DDSCTSFDAA AASQENQLKS  720
EEGNHWSGGF NGSSNRGDHE YVLEPCDTKI WDAGYMTCPE NKVDFLPTCN MIEEVFGKES  780
WNYKARDGKN LG