PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g705250.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 229aa MW: 26833.2 Da PI: 8.3579 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 82.8 | 5.6e-26 | 32 | 122 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY eYAk++GF++r+++ ++s +n i+ r+fvCs+eg+r+ +++ +++ +r+ tr gCka++++ +++g+w vtk+ eHnH+l+ Pd.00g705250.m01 32 DFYYEYAKHTGFTIRTNRIRHSLKNMAIIGRDFVCSREGFRAAKHTLrKDRVLPPRPITREGCKAMIRLAARDEGRWIVTKFIREHNHKLM 122 6*****************************************9998822333349**********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MPLQHCNFVN DGLISMEPST GMSFQSLDDA RDFYYEYAKH TGFTIRTNRI RHSLKNMAII 60 GRDFVCSREG FRAAKHTLRK DRVLPPRPIT REGCKAMIRL AARDEGRWIV TKFIREHNHK 120 LMAHCKFPGE LPIINILSEV EKDKKIQDLY DELQRERERS AAFQQQLCMI LKDLEEHAEY 180 ISFCCWKIAC CQERHAGDFL LLFKKMMNEL AKEICMRMCS PANIDLKDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07500.1 | 1e-37 | FAR1 family protein |