PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g703350.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 530aa MW: 59172.7 Da PI: 10.8774

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g703350.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.3	2.2e-10	11	62	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.........TTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg.........kgRtlkqcksrwq 45 +W t E++llv+av+++G+++W+++a +++ + +t+ +c++++ Pd.00g703350.m01 11 PWGTLEELLLVCAVNRHGTKSWDSVAMEVQtkssstfasTLLTAQDCRDKFD 62 7***********************************9999***99985 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MAREHGTSGH PWGTLEELLL VCAVNRHGTK SWDSVAMEVQ TKSSSTFAST LLTAQDCRDK 60 FDDLKRRFVS KNDNQSHSLG QMVDELRNLR VDELRHEEDN KKGGETVGAT QLGESNEFWE 120 SVSESKREGK RGGVASKQNS DVQSSASLSK RKRLSPATSK GIKPKLVKHE PLIKVLRIIR 180 SHRLGSVFER RLRSQESERY KSLIRQHMDL HEVQSRLNKG VYTDCTHKFF RDLLLLFNNA 240 VVFLRKTSPE HMAAQELRSI VLKEMKDQLQ KPQPAIDTVK LHAPKLESKV PKIEPDSSVK 300 PSKPSVIACG LRRSANGGGG AKNRKGDKKE RGEVEEKGKV SEVEDKGIRK KRTQERGGRR 360 GSRRDSSKNV GKTEHAYGGN ELSSHDGLEE MKMEKIENAK MTKQGAARTF LKRMKQNSTS 420 IEVKRGTSDV SVGGESEDSM VEEDEKKQKG KTKPDERKKR VTRSSTGRRG GRGGGRRDEE 480 SSGRAKRGVG RPPKRPETAE AGNGSGKRGR GNGEADQMGS AGRPRKRTRR

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MAREHGTSGH PWGTLEELLL VCAVNRHGTK SWDSVAMEVQ TKSSSTFAST LLTAQDCRDK  60
FDDLKRRFVS KNDNQSHSLG QMVDELRNLR VDELRHEEDN KKGGETVGAT QLGESNEFWE  120
SVSESKREGK RGGVASKQNS DVQSSASLSK RKRLSPATSK GIKPKLVKHE PLIKVLRIIR  180
SHRLGSVFER RLRSQESERY KSLIRQHMDL HEVQSRLNKG VYTDCTHKFF RDLLLLFNNA  240
VVFLRKTSPE HMAAQELRSI VLKEMKDQLQ KPQPAIDTVK LHAPKLESKV PKIEPDSSVK  300
PSKPSVIACG LRRSANGGGG AKNRKGDKKE RGEVEEKGKV SEVEDKGIRK KRTQERGGRR  360
GSRRDSSKNV GKTEHAYGGN ELSSHDGLEE MKMEKIENAK MTKQGAARTF LKRMKQNSTS  420
IEVKRGTSDV SVGGESEDSM VEEDEKKQKG KTKPDERKKR VTRSSTGRRG GRGGGRRDEE  480
SSGRAKRGVG RPPKRPETAE AGNGSGKRGR GNGEADQMGS AGRPRKRTRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	447	459	KQKGKTKPDERKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	4e-22	MYB_related family protein