PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g702390.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 351aa MW: 38851.5 Da PI: 5.2714 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.2 | 9.9e-19 | 31 | 81 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++ GVr+++ +g+WvAeI+d +n + r +lg+f taeeAa+a+++a+ l+g Pd.00g702390.m01 31 CKFVGVRQRP-SGKWVAEIKDT-TN--KIRMWLGTFETAEEAARAYDEAAYLLRG 81 799*******.7*********3.33..5**********************99997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MEEEHEEAPK QQKENGVSVS ANKQSKLKTK CKFVGVRQRP SGKWVAEIKD TTNKIRMWLG 60 TFETAEEAAR AYDEAAYLLR GSNTRTNFST HVPSNSPLSL KIRNLLNHKK SLNLKQKQSP 120 PPTPNSSLKS TPIAATTTRI SSGSSICSGN IQAFSDTSSD NCNANSSSSL PCYKSQDIQA 180 FDDAYRPDLS NCIGELQPAM FHLDQSWPFL AGFDQLPLTH EGMDLTKGID QAGMQDLGAN 240 AGDFDDDEEF FGYENDRNLM FKSKKSIVDK IGIGSSDIGL LECSSSRIAS SWLRKSLQTW 300 STEDLDKMPT YAWAIAAKEY LQNSLLNMNS VESACGCVVS LLFWVCEYTI D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 4e-30 | ERF family protein |