PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g701120.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 287aa    MW: 32241.4 Da    PI: 4.4474
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g701120.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.52.8e-09170214655
                       HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +++ r RR+ri ++ +eL +l+P a     +K++ ae+L+ A +Y+k Lq
  Pd.00g701120.m01 170 SIAARERRRRITEKTQELGRLIPGA-----TKMNTAEMLQAAYKYVKFLQ 214
                       677899******************9.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MAMMSSFCPA DDWGSFQFLN PDMNMVSFQA QQEQLAAASG ILGLQDYSLP NFPDYTTCID  60
PLFETYESSS SENFLLPDFY LPTENINLSS FQSPEIFSSL DEYGCSYQQN PKRQKFGVCS  120
FFNAYDDQFL QPQLLAPTPS PQTQIQQQPS YECAKMNKPN GGAVTLSAQS IAARERRRRI  180
TEKTQELGRL IPGATKMNTA EMLQAAYKYV KFLQAQVSVL KLMTDSPVHQ EKNDLQAVAS  240
PIVQEKLYSE EKCLVSKEFV QVLANDHDIE SKPLLKDSVA QLLQTNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.14e-22bHLH family protein