PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g699280.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

E2F/DP

Protein Properties

Length: 432aa MW: 48564.3 Da PI: 6.4205

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g699280.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	84.9	6e-27	158	222	1	70
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwk 70 r+++sL+llt+kf++l++++++++++ln+ a+ L +v ++RRiYDi+NVLe++nliek++kn+irwk Pd.00g699280.m01 158 RYDSSLGLLTKKFVSLIQEAKDRTLDLNKTAEVL---EV--QKRRIYDITNVLEGINLIEKTSKNHIRWK 222 6899****************************...99..**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MEMEDPNRLL RPSQFEFQLL HSHSQTQNHQ NHPSYLLPSL PSSQRLLPHS FPAFAPSIDS 60 GHHRLFDSAF ASHADAHSAF AKLALRPKKE IDDVAQIGGH EAAAGPSKVL HDLSLSIPQS 120 CTGRKHNPKS KVPKHTRAGT QRSTADSHNG LNPAIGCRYD SSLGLLTKKF VSLIQEAKDR 180 TLDLNKTAEV LEVQKRRIYD ITNVLEGINL IEKTSKNHIR WKCYDGSTPG ELDDQVSRIQ 240 DEVESLYAEE CRLDDAIREK LELLRALEED EKNKKFLFLT EEDILSLRCF QNQTLIAIKA 300 PQASYIEVID PDDEEDTCFP QKQFRMIVRS TIGPIHLYLL SKYQGQRENI AVKQAKSVGS 360 SSWNSSDYSR VEDGGPSSYH QGNKKDSSEI LSLPGSEASS GIQKIIPSHV NANDDYWFRS 420 EPEVSLTDLW AN

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MEMEDPNRLL RPSQFEFQLL HSHSQTQNHQ NHPSYLLPSL PSSQRLLPHS FPAFAPSIDS  60
GHHRLFDSAF ASHADAHSAF AKLALRPKKE IDDVAQIGGH EAAAGPSKVL HDLSLSIPQS  120
CTGRKHNPKS KVPKHTRAGT QRSTADSHNG LNPAIGCRYD SSLGLLTKKF VSLIQEAKDR  180
TLDLNKTAEV LEVQKRRIYD ITNVLEGINL IEKTSKNHIR WKCYDGSTPG ELDDQVSRIQ  240
DEVESLYAEE CRLDDAIREK LELLRALEED EKNKKFLFLT EEDILSLRCF QNQTLIAIKA  300
PQASYIEVID PDDEEDTCFP QKQFRMIVRS TIGPIHLYLL SKYQGQRENI AVKQAKSVGS  360
SSWNSSDYSR VEDGGPSSYH QGNKKDSSEI LSLPGSEASS GIQKIIPSHV NANDDYWFRS  420
EPEVSLTDLW AN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G47870.2	7e-87	E2F/DP family protein