PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g696340.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 260aa MW: 28416.6 Da PI: 6.1545 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.3 | 0.00024 | 98 | 120 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F ++ L H++ H Pd.00g696340.m01 98 FSCNYCKRKFYSSQALGGHQNAH 120 89*****************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MVTPNLNLEY ENDSEVTSQE NSNIPLQEES PDLSKDSTTT SSCLTNQTNL QQQDPGPLSL 60 NLTLQFSSRD IELKGTGETS STEGAAPPTS EATMPRVFSC NYCKRKFYSS QALGGHQNAH 120 KRERTMAKRA MRMGMFPDRY TSLASLPLHG SAASAFRSLG IEAHAAVHQN IMIPSDQRLP 180 VPDTRGVARF QQGYFGVPMF MEEDDVGMFW PGSFRQVGEG VGGHHSNMQF SQNPTMNSGG 240 STMPPNTKTS SSSPDLTLKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66140.1 | 3e-48 | C2H2 family protein |