PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g690230.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

E2F/DP

Protein Properties

Length: 670aa MW: 74507.6 Da PI: 5.0789

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g690230.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	24.7	3.9e-08	561	595	1	38
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsed 38 r ++sL+llt+kf++l++++e+gi++ln++a++L + Pd.00g690230.m01 561 RFDSSLGLLTKKFINLIKHAEDGILDLNNAADTL---E 595 6789*****************************9...3 PP

Sequence ? help Back to Top
Protein Sequence Length: 670 aa Download sequence
MLGWMKSLNP EINGVTGSES NLISTSDPNS TQVFFGDRSS YVDPNPGHSI QAIYEQVFGE 60 PWTEASASKT LPPKMNGFAQ NAEKTQTGLA ETVMNGFKPE NVPVTAELVR EFAVCDRWFA 120 SIPSSTQPNR QFVHSATSHG LTSNDTQKLV EGLPQKTIFQ SLDEEDLSFG IYFQSFPSTL 180 LYRKLRKLKY IDNFHAFDLQ FKKHCEEGKL PNYVVVEQRF FDVLSFPAND DHPSHDVSEG 240 QKFIKEVYEA LRASPQWNEM LFVIIYDEHG GFYDHVPTPV TDVPSPDDIV GPEPYNFKFD 300 RLGVRVPAIL ISPWIERGTV LHGPSGPYPS SEFEHSSIPA TVKKIFNLKE FLTKRDAWAG 360 TFEGVLSRTS PRTDCPVTLG EPMKLRETAA KEGGNLSDFQ EELVQLAAAL NGDHRKDIYP 420 NKLVENISVV EALKYVEAAF EKFSDACEKA RESGADESEI VVCETSPSPP HHKSFAQRIF 480 SCLLKRKSDA ADYEAESSDR TAAPGYTEAV TSPLQTPVSS KVGKANKTSR LTKCSRSGPQ 540 TPASNVGSPS GPNLTPAGPC RFDSSLGLLT KKFINLIKHA EDGILDLNNA ADTLEVTTFL 600 SVVMFEKQDG VVLMATTGNL KQIDEALQRP GRMDRDEDNK EKETARFAQL WNKIISSFRE 660 EDLISDRFFP

Sequence ? help Back to Top

Protein Sequence Length: 670 aa Download sequence

MLGWMKSLNP EINGVTGSES NLISTSDPNS TQVFFGDRSS YVDPNPGHSI QAIYEQVFGE  60
PWTEASASKT LPPKMNGFAQ NAEKTQTGLA ETVMNGFKPE NVPVTAELVR EFAVCDRWFA  120
SIPSSTQPNR QFVHSATSHG LTSNDTQKLV EGLPQKTIFQ SLDEEDLSFG IYFQSFPSTL  180
LYRKLRKLKY IDNFHAFDLQ FKKHCEEGKL PNYVVVEQRF FDVLSFPAND DHPSHDVSEG  240
QKFIKEVYEA LRASPQWNEM LFVIIYDEHG GFYDHVPTPV TDVPSPDDIV GPEPYNFKFD  300
RLGVRVPAIL ISPWIERGTV LHGPSGPYPS SEFEHSSIPA TVKKIFNLKE FLTKRDAWAG  360
TFEGVLSRTS PRTDCPVTLG EPMKLRETAA KEGGNLSDFQ EELVQLAAAL NGDHRKDIYP  420
NKLVENISVV EALKYVEAAF EKFSDACEKA RESGADESEI VVCETSPSPP HHKSFAQRIF  480
SCLLKRKSDA ADYEAESSDR TAAPGYTEAV TSPLQTPVSS KVGKANKTSR LTKCSRSGPQ  540
TPASNVGSPS GPNLTPAGPC RFDSSLGLLT KKFINLIKHA EDGILDLNNA ADTLEVTTFL  600
SVVMFEKQDG VVLMATTGNL KQIDEALQRP GRMDRDEDNK EKETARFAQL WNKIISSFRE  660
EDLISDRFFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.3	3e-29	E2F/DP family protein