PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g690090.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 423aa MW: 47081.5 Da PI: 6.306

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g690090.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.2	2.5e-12	222	268	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + E+ RR ++N ++ Lr llP++ +K + a+i+ +A++YIk+L Pd.00g690090.m01 222 TKHFATEKHRRVQLNGKYTALRNLLPHP-----TKSDRASIVGEAIDYIKEL 268 78************************.....9**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MEELSYPHQQ DHHAAMEIEL QNELGFNPYS TNTDQNNNSS HLVSFEQQTN WDNIHGVHDQ 60 MEQQLQDGAN GAYPPTPDLL NLFSLPRCSP SSVLQNSSIT FTNPNPKSSN FPNSLGFLGD 120 VHGGIDTPPG TASSVLYDPL FHLNLPPQPP LFRELLQSLP HGYSLPGSRN GSLFTSGGDE 180 GEGIGGGVYS DGINNGRQFE NGVLEFSREM GSIGRGRDVK GTKHFATEKH RRVQLNGKYT 240 ALRNLLPHPT KSDRASIVGE AIDYIKELLR TVEELKLLVE KKRCGRERSK RRRTEQDGGA 300 GDDESCNMKP LGDPHDQYGS LRSSWLQRKS KDTEVDIRII DDEVTIKLVQ RKKINLLLYV 360 SKLLDELQLD LHHVAGGHIG NSYSFLFNTK MYEGSSLYAS AIAQKLIEVL DKQYAAVPPT 420 NSF

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MEELSYPHQQ DHHAAMEIEL QNELGFNPYS TNTDQNNNSS HLVSFEQQTN WDNIHGVHDQ  60
MEQQLQDGAN GAYPPTPDLL NLFSLPRCSP SSVLQNSSIT FTNPNPKSSN FPNSLGFLGD  120
VHGGIDTPPG TASSVLYDPL FHLNLPPQPP LFRELLQSLP HGYSLPGSRN GSLFTSGGDE  180
GEGIGGGVYS DGINNGRQFE NGVLEFSREM GSIGRGRDVK GTKHFATEKH RRVQLNGKYT  240
ALRNLLPHPT KSDRASIVGE AIDYIKELLR TVEELKLLVE KKRCGRERSK RRRTEQDGGA  300
GDDESCNMKP LGDPHDQYGS LRSSWLQRKS KDTEVDIRII DDEVTIKLVQ RKKINLLLYV  360
SKLLDELQLD LHHVAGGHIG NSYSFLFNTK MYEGSSLYAS AIAQKLIEVL DKQYAAVPPT  420
NSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	6e-87	bHLH family protein