PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g688600.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 230aa MW: 25872.9 Da PI: 6.0302 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25 | 3.4e-08 | 116 | 163 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L+ l+P + k + a +L ++ Y++sLq Pd.00g688600.m01 116 SHSLAERVRREKINERLRCLQNLVPGC----YKTMGMAVMLDVVISYVQSLQ 163 8*************************8....355888999999999999998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 230 aa Download sequence |
MELIDNLCEL ENLSANHHEI MALSNGMSFS DHQRQTNQLP LNFIHDNIQS FSHSDDPNHD 60 VLVAHSTSLT GDFAQESEKG KPLGGRKRKR NNIDKDGEKL KEVIHVRAKR GQATDSHSLA 120 ERVRREKINE RLRCLQNLVP GCYKTMGMAV MLDVVISYVQ SLQNQIEFLS MKLSAASVYY 180 DFNSPGVDAL DTMQQQGTNN AYGEVQEEMV RSEGYGGGLS NYNNNSTWPI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G25330.1 | 3e-51 | bHLH family protein |