PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g686770.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

E2F/DP

Protein Properties

Length: 783aa MW: 88189.5 Da PI: 8.5517

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g686770.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	83.8	1.4e-26	158	222	1	70
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwk 70 r+++sL+llt+kf++l++++++++++ln+ a+ L +v ++RRiYDi+NVLe++nliek++kn+irwk Pd.00g686770.m01 158 RYDSSLGLLTKKFVSLIQEAKDRTLDLNKTAEVL---EV--QKRRIYDITNVLEGINLIEKTSKNHIRWK 222 6899****************************...99..**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 783 aa Download sequence
MEMEDPNRLL RPSQFEFQLL HSHSQTQNHQ NHPSYLLPSL PSSQRLLPHS FPAFAPSIDS 60 GHHRLSDSAF ASHADAHSAF AKLGLRPKKE IDDVAQIGGH EAAAGPSKVL HDLSLSIPQS 120 CTGRKHNPKS KVPKHTKAGT QRSTADSHNG LNPAIGCRYD SSLGLLTKKF VSLIQEAKDR 180 TLDLNKTAEV LEVQKRRIYD ITNVLEGINL IEKTSKNHIR WKCYDGSTPG ELDDQVSRIQ 240 DEVESLYAEE CRLDDAIREK LELLRALEED EKNKKFLFLT EEDILSLRCF QNQTLIAIKA 300 PQASYIEVID PDDEEDTCFP QKRFRMIVRS TIGPIHLYLL SKYQGQRENI AVKQAKSVVS 360 SSWNSSDYSR VEDGGPSSYH QGNKKDSSEI LSLPGSEASS GIQKIIPSHV NANDDYWFRS 420 EPERIRTGPR ANDLSFKTIL GRVVQHWPMD IDRSVNGNQS LPPPTSLRFV DAFRRRRFRP 480 TAIPEHRQEV YKMIGSFLTR GLVMVLGYAY PAYECYKTVE KNKPEIEQLR FWCQYWILVA 540 VLTVCERIGD AFVSWVPMYS EAKLLFIIYL WFPKTKGTTY VYDSFFRPYL AKHENEIDRN 600 LLELRTRAGD IAVVYWQRAA SYGQTRIFDI LQYVAAQSTP RPRPAQPQQG VRARQPPAAR 660 QPPPSPNQQP AAKTQLQPEE LPSPTSSTTS SKDQREIAEA LAPSTKPKAA PQAAVSNTQK 720 ATAAASESAS QSVPAEEVEP MQTEAVASSS STEDTNPPPK ETVMEDSIRF TRARLRKARS 780 AGR

Sequence ? help Back to Top

Protein Sequence Length: 783 aa Download sequence

MEMEDPNRLL RPSQFEFQLL HSHSQTQNHQ NHPSYLLPSL PSSQRLLPHS FPAFAPSIDS  60
GHHRLSDSAF ASHADAHSAF AKLGLRPKKE IDDVAQIGGH EAAAGPSKVL HDLSLSIPQS  120
CTGRKHNPKS KVPKHTKAGT QRSTADSHNG LNPAIGCRYD SSLGLLTKKF VSLIQEAKDR  180
TLDLNKTAEV LEVQKRRIYD ITNVLEGINL IEKTSKNHIR WKCYDGSTPG ELDDQVSRIQ  240
DEVESLYAEE CRLDDAIREK LELLRALEED EKNKKFLFLT EEDILSLRCF QNQTLIAIKA  300
PQASYIEVID PDDEEDTCFP QKRFRMIVRS TIGPIHLYLL SKYQGQRENI AVKQAKSVVS  360
SSWNSSDYSR VEDGGPSSYH QGNKKDSSEI LSLPGSEASS GIQKIIPSHV NANDDYWFRS  420
EPERIRTGPR ANDLSFKTIL GRVVQHWPMD IDRSVNGNQS LPPPTSLRFV DAFRRRRFRP  480
TAIPEHRQEV YKMIGSFLTR GLVMVLGYAY PAYECYKTVE KNKPEIEQLR FWCQYWILVA  540
VLTVCERIGD AFVSWVPMYS EAKLLFIIYL WFPKTKGTTY VYDSFFRPYL AKHENEIDRN  600
LLELRTRAGD IAVVYWQRAA SYGQTRIFDI LQYVAAQSTP RPRPAQPQQG VRARQPPAAR  660
QPPPSPNQQP AAKTQLQPEE LPSPTSSTTS SKDQREIAEA LAPSTKPKAA PQAAVSNTQK  720
ATAAASESAS QSVPAEEVEP MQTEAVASSS STEDTNPPPK ETVMEDSIRF TRARLRKARS  780
AGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G47870.2	8e-76	E2F/DP family protein