PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g682220.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 187aa MW: 21012.9 Da PI: 5.297 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.8 | 4.7e-09 | 148 | 174 | 4 | 30 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 4 ahnerErrRRdriNsafeeLrellPka 30 hn+ Er+RR++i+ ++ L++l+P++ Pd.00g682220.m01 148 LHNMSERKRRKKIRGKLGALQQLIPNC 174 5*************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MTHQVPDWTA TEEGDSSKSF QYEEFGPLPD SVVPHHHPHP QTETETDHDY SLWNINTSGA 60 SGATGAAEDH NHRCFQEIFE DLSNIPLEPT ITPNAIFASD KHFVCDFDKG ESSSGLKTTS 120 RFMETKSVSG EIRQKQDERP KRTRAAELHN MSERKRRKKI RGKLGALQQL IPNCNTGDDD 180 SVDYAAD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20180.1 | 3e-07 | bHLH family protein |