PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g681540.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 339aa MW: 38114.2 Da PI: 4.6104 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.5 | 8.1e-19 | 117 | 166 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 s ++GVr++k +g+W+AeIrd + + +r +lg+f t+e+A ka++a r+++e Pd.00g681540.m01 117 SPFRGVRQRK-WGKWAAEIRDpF-----KgRRTWLGTFNTPEDASKAYEAKRLEFE 166 679******9.**********55.....45***********************987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 339 aa Download sequence |
MPEPRKQQLN QRNGFRKFKE DRFPAEDSKK VRKVRIICYD PDATDESSSS EDEGRGRSYV 60 KKPKRIVHEI NLHPIFTPPA KVVVEPESSC QDSNNGVKTP KPKVGFFART TRRQSSSPFR 120 GVRQRKWGKW AAEIRDPFKG RRTWLGTFNT PEDASKAYEA KRLEFEELWA RETAAPAASS 180 EKSNNTSSSA VVSHMSYANI QQPVSSEDSD SALSRRSPYS VLDLETSASN NIGNVVDLEK 240 EVVDDSPDLG ELQIPDLGFL DDPLGSLPFE NELSLGPELD SLCLEEFGKF FNEFSSIEDV 300 QIGGIDGYEP TSLPDFYFED LGKDDISCWL DEPLNIACQ |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 29 | 64 | KKVRKVRIICYDPDATDESSSSEDEGRGRSYVKKPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G68550.1 | 1e-30 | ERF family protein |