PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g680140.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 561aa MW: 59981.7 Da PI: 5.0821

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g680140.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.2	7e-09	377	425	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq Pd.00g680140.m01 377 NSHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 425 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MDMGDQDKFE LENRNEDPMN YSPGLAPDWR FGGSNLTNTP VGLVSTGNSM AVSKGDLVGS 60 SSRPSASMVD SFNPTLWDHP TNSQDLGGFC DINGQTSAST SDTIGIRKGI PVSLRSGIDR 120 PLEMCWNPPN SMLKGGIFLP NGPGMLPQSL SQFPADSAFI ERAARFSCFN GGSFSDMLNP 180 FGVPESMSLY SRGGGMMHWT PEVVAGNGSK AVSCAQSQRN ELNGGDASRD VSLPIEHGTA 240 EGSPLKNEKK SESLVKSHDE AKHTVGGSGD ESDEADFSGG AGQEEPSMLE GTGVEPSSKG 300 SKKRKRSGQA NELDQADAQK PGESAQDASE IQQKGEQHPA STTNKTTVKQ SKQGSQASDP 360 PKEEYIHVRA RRGQATNSHS LAERVRREKI SERMKFLQDL VPGCSKVTGK AVMLDEIINY 420 VQSLQRQVEF LSMKLATVNP RLDFNIEGLL TKDILQSRVG PSSTLGFSPD VPIAYPQLHP 480 SQSGLIQAGL PGMGSPSDIL RRAMSSQMTP MTGGFKEPSQ LPNVWEDELH NVVQMSYGAG 540 TPTGSQDVDG SGTPGQMKVE L

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MDMGDQDKFE LENRNEDPMN YSPGLAPDWR FGGSNLTNTP VGLVSTGNSM AVSKGDLVGS  60
SSRPSASMVD SFNPTLWDHP TNSQDLGGFC DINGQTSAST SDTIGIRKGI PVSLRSGIDR  120
PLEMCWNPPN SMLKGGIFLP NGPGMLPQSL SQFPADSAFI ERAARFSCFN GGSFSDMLNP  180
FGVPESMSLY SRGGGMMHWT PEVVAGNGSK AVSCAQSQRN ELNGGDASRD VSLPIEHGTA  240
EGSPLKNEKK SESLVKSHDE AKHTVGGSGD ESDEADFSGG AGQEEPSMLE GTGVEPSSKG  300
SKKRKRSGQA NELDQADAQK PGESAQDASE IQQKGEQHPA STTNKTTVKQ SKQGSQASDP  360
PKEEYIHVRA RRGQATNSHS LAERVRREKI SERMKFLQDL VPGCSKVTGK AVMLDEIINY  420
VQSLQRQVEF LSMKLATVNP RLDFNIEGLL TKDILQSRVG PSSTLGFSPD VPIAYPQLHP  480
SQSGLIQAGL PGMGSPSDIL RRAMSSQMTP MTGGFKEPSQ LPNVWEDELH NVVQMSYGAG  540
TPTGSQDVDG SGTPGQMKVE L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	302	307	KKRKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.1	1e-133	bHLH family protein