PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g678970.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 533aa MW: 59966.5 Da PI: 4.4673

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g678970.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.9	4.1e-07	281	328	3	47
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 rW++eE+e ++++v + Wk + ++ R+ +++s+++++ Pd.00g678970.m01 281 RWSEEEEETFLEVVYSNPASvgrnFWKQLSVVFP-SRSKRELVSYYFNV 328 9***********9999889999******.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 533 aa Download sequence
MAISHTHLSF ESEEFVEVNM GFKRPFDDVD FQELPFKHPR QLEFSDKLAP FSDAVSCYGA 60 PRKTYVSGED GNVVGKSQWL EVLEKYTVNE NSTPVNKVIG TPFSLTTRSC REEDVGPGPD 120 AYLPPAGDFE FDFPRRTFVP FKDVYSSLAD RSPRKPVPVG PDHQARIPTW TGRVKCLDQT 180 DESNLNRFSL HSLESEKVVN NASEEKLLGT SVIPMPDSNL SALKCDKVGL GRTDCSCLDP 240 GTVRCVQKHV MDAREELRRT LGNEKFVKLG FCDMGEEVAR RWSEEEEETF LEVVYSNPAS 300 VGRNFWKQLS VVFPSRSKRE LVSYYFNVFM LRRRAVQNRS NILEIDSDDD EWHGDNGGSI 360 DRRVAEYDED SVIESRDSSE EDGGIDNMES YMLKTVDDGK FDIVGQHGEK TSGCTREEFD 420 FQDDSCVSFE FQSNMHDSCD RIDAGAAGSA LQVTGFRNDR SKCLHGQPDA SSDAVGHAYL 480 LEPCDAKVWD ARFPLDAMKG VDVLPTWSMI EEIFDEGMGD YKTRDEQKGP ASG

Sequence ? help Back to Top

Protein Sequence Length: 533 aa Download sequence

MAISHTHLSF ESEEFVEVNM GFKRPFDDVD FQELPFKHPR QLEFSDKLAP FSDAVSCYGA  60
PRKTYVSGED GNVVGKSQWL EVLEKYTVNE NSTPVNKVIG TPFSLTTRSC REEDVGPGPD  120
AYLPPAGDFE FDFPRRTFVP FKDVYSSLAD RSPRKPVPVG PDHQARIPTW TGRVKCLDQT  180
DESNLNRFSL HSLESEKVVN NASEEKLLGT SVIPMPDSNL SALKCDKVGL GRTDCSCLDP  240
GTVRCVQKHV MDAREELRRT LGNEKFVKLG FCDMGEEVAR RWSEEEEETF LEVVYSNPAS  300
VGRNFWKQLS VVFPSRSKRE LVSYYFNVFM LRRRAVQNRS NILEIDSDDD EWHGDNGGSI  360
DRRVAEYDED SVIESRDSSE EDGGIDNMES YMLKTVDDGK FDIVGQHGEK TSGCTREEFD  420
FQDDSCVSFE FQSNMHDSCD RIDAGAAGSA LQVTGFRNDR SKCLHGQPDA SSDAVGHAYL  480
LEPCDAKVWD ARFPLDAMKG VDVLPTWSMI EEIFDEGMGD YKTRDEQKGP ASG