PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g678390.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 376aa MW: 41507.9 Da PI: 7.6648

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g678390.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.8	1.9e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++ +G g+W++ + + g+ R++k+c++rw +yl Pd.00g678390.m01 14 KGPWTPEEDQKLLTYIEHHGHGSWRALPPKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	49.2	1.2e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++ G++ W++Ia +++ +Rt++++k++w+++l Pd.00g678390.m01 67 RGKFSLQEEQSIIQLHALIGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MGRSPCCEKV GLKKGPWTPE EDQKLLTYIE HHGHGSWRAL PPKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQSIIQ LHALIGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLTKLG 120 IDPMTHKPRH HHGSGSGHAK DAANISHMAQ WESARLEAEA RLVRESKLQV ISTTNPNHLL 180 ISSSSDATHQ GHVINKAPPG LPCLDVLRAW QGTWSTKPTV RNVNSTIISG GSMMSMDDLE 240 SPTSTLNFPH INALNPPMQN AVNINGLNEN PVVPSEVLQD KVNVTYGCMD ACAATPAWFV 300 EEGTFRSGND EGVGNVIMPA GVSNIMMEDF TDVLVYNSSL PGEISDNGGS NFEENRSYWD 360 SILNLVNASP SGSPVF

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MGRSPCCEKV GLKKGPWTPE EDQKLLTYIE HHGHGSWRAL PPKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQSIIQ LHALIGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLTKLG  120
IDPMTHKPRH HHGSGSGHAK DAANISHMAQ WESARLEAEA RLVRESKLQV ISTTNPNHLL  180
ISSSSDATHQ GHVINKAPPG LPCLDVLRAW QGTWSTKPTV RNVNSTIISG GSMMSMDDLE  240
SPTSTLNFPH INALNPPMQN AVNINGLNEN PVVPSEVLQD KVNVTYGCMD ACAATPAWFV  300
EEGTFRSGND EGVGNVIMPA GVSNIMMEDF TDVLVYNSSL PGEISDNGGS NFEENRSYWD  360
SILNLVNASP SGSPVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-110	MYB family protein