PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g677770.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 286aa    MW: 32489.1 Da    PI: 4.1674
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g677770.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.91.5e-151461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd++l++ +   G  +W+++++  g+ R++k+c++rw +yl
  Pd.00g677770.m01 14 KGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61
                      79******************************99************97 PP
2Myb_DNA-binding53.17.4e-1770111447
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        ++ E++  +d+++qlG++ W++Ia++++ gRt++++k++w+++
  Pd.00g677770.m01  70 LSETEEKMVIDLHAQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 111
                       5899***************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MGRQPCCDKV GLKKGPWTAE EDKKLINFIL TNGQCCWRAV PKLAGLLRCG KSCRLRWTNY  60
LRPDLKRGLL SETEEKMVID LHAQLGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLKKMG  120
IDPLTHKPIA NDVNDQSQQE QSQNQQEEAQ KSCLANDTFE VVQNTPAAQA IEEGGGGDEL  180
DKMELLIDGF CTDEVPLIEP PEILVPYVLE DSDLAPTIDN PLSATDNYAI PNLDDQLLDN  240
EEFHIRVDMD EMVDEHEPGN EDEEDEQSSD DLSTENEDEL YDDMEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16600.14e-92MYB family protein