PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g677480.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 401aa    MW: 43529.6 Da    PI: 6.6734
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g677480.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.91.8e-15220256135
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++Cg  +  Tp++Rrgpdg++tLCnaCGl+++ kg+
  Pd.00g677480.m01 220 CRHCGINEkcTPMMRRGPDGPRTLCNACGLMWANKGT 256
                       **********************************997 PP

2AP257.34e-18307357256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       +++ Vr ++ +gr++AeIrdp++   rkr++lg+++taeeAa+ +++a++kl+g+
  Pd.00g677480.m01 307 KISRVRKRP-WGRYAAEIRDPTQ---RKRVWLGTYDTAEEAAAVYDRAALKLRGP 357
                       6777*****.**********965...5**************************95 PP

Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MDDICGSDEP MHMNDNLHLQ YMQEHEHHHG LDHISNVNGV ADDHDNGSGG AELVQADVPS  60
DPMNLSDTRD GMMNHGPENG DQLTLSFQGQ VFVFDCVSPE KVQAVLLLLG GSEVPPSMPA  120
VPVTTEHTNR GLTSTPQRLS VPQRLASLIR FREKRKERNF DKKIRYTVRK EVALRMQRKK  180
GQFTSSKPNN DDSASAVTSS GSNGSWSQDG NGSQHQEAVC RHCGINEKCT PMMRRGPDGP  240
RTLCNACGLM WANKGTLRDL SKASEAAAPQ AGQNPSLVRI ILADADATDS SSDEDSVVPG  300
VKRHVRKISR VRKRPWGRYA AEIRDPTQRK RVWLGTYDTA EEAAAVYDRA ALKLRGPHAV  360
TNFTIPVIAE ETVADEVVPA AGSSHVSEVG GEGGAAGCVS I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-118GATA family protein