PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g677480.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 401aa MW: 43529.6 Da PI: 6.6734 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 47.9 | 1.8e-15 | 220 | 256 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg + Tp++Rrgpdg++tLCnaCGl+++ kg+ Pd.00g677480.m01 220 CRHCGINEkcTPMMRRGPDGPRTLCNACGLMWANKGT 256 **********************************997 PP | |||||||
2 | AP2 | 57.3 | 4e-18 | 307 | 357 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +++ Vr ++ +gr++AeIrdp++ rkr++lg+++taeeAa+ +++a++kl+g+ Pd.00g677480.m01 307 KISRVRKRP-WGRYAAEIRDPTQ---RKRVWLGTYDTAEEAAAVYDRAALKLRGP 357 6777*****.**********965...5**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 401 aa Download sequence |
MDDICGSDEP MHMNDNLHLQ YMQEHEHHHG LDHISNVNGV ADDHDNGSGG AELVQADVPS 60 DPMNLSDTRD GMMNHGPENG DQLTLSFQGQ VFVFDCVSPE KVQAVLLLLG GSEVPPSMPA 120 VPVTTEHTNR GLTSTPQRLS VPQRLASLIR FREKRKERNF DKKIRYTVRK EVALRMQRKK 180 GQFTSSKPNN DDSASAVTSS GSNGSWSQDG NGSQHQEAVC RHCGINEKCT PMMRRGPDGP 240 RTLCNACGLM WANKGTLRDL SKASEAAAPQ AGQNPSLVRI ILADADATDS SSDEDSVVPG 300 VKRHVRKISR VRKRPWGRYA AEIRDPTQRK RVWLGTYDTA EEAAAVYDRA ALKLRGPHAV 360 TNFTIPVIAE ETVADEVVPA AGSSHVSEVG GEGGAAGCVS I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 1e-118 | GATA family protein |