PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g675630.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 369aa MW: 40735.3 Da PI: 7.0633

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g675630.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.1	4e-18	23	70	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l ++v+++G g+W+++ r g++R++k+c++rw ++l Pd.00g675630.m01 23 KGPWTAVEDQILMEYVRKHGEGNWNAVQRNSGLNRCGKSCRLRWANHL 70 79******************************************9986 PP
2	Myb_DNA-binding	22.4	2.9e-07	76	108	1	35
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgR 35 +g+++++E+ l++++++++G++ W++ a+ ++ Pd.00g675630.m01 76 KGAFSPDEERLILELHAKYGNK-WARMASQST-TL 108 799*****************.*998765.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MTPSRSNNNS GLLQQSEGRG LKKGPWTAVE DQILMEYVRK HGEGNWNAVQ RNSGLNRCGK 60 SCRLRWANHL RPNLKKGAFS PDEERLILEL HAKYGNKWAR MASQSTTLTS LPLFDPSNPT 120 TTSSFSSFTF HRPAPILGAP VRYKRYRDSV GFSPPVSPTP QRSTSILRAN SMPDIASSHL 180 TSTNSMPESA AFQFPRTLNP SLPPLPSSRT QFEYSESFLS STGSVYSVKS ELPSSQVSQT 240 QSEVTIDTKR ANGLFSSFEE KHVLDNYTQW LQSTSSMEGS LLEAKPIQDD HISSLPEDLS 300 KLFSFIPSTE PISDWYSDSG ELSNGHSSGV TDACLDFDMQ QHMASLFPVT ATAEHGKASS 360 SWDNLPGIC

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MTPSRSNNNS GLLQQSEGRG LKKGPWTAVE DQILMEYVRK HGEGNWNAVQ RNSGLNRCGK  60
SCRLRWANHL RPNLKKGAFS PDEERLILEL HAKYGNKWAR MASQSTTLTS LPLFDPSNPT  120
TTSSFSSFTF HRPAPILGAP VRYKRYRDSV GFSPPVSPTP QRSTSILRAN SMPDIASSHL  180
TSTNSMPESA AFQFPRTLNP SLPPLPSSRT QFEYSESFLS STGSVYSVKS ELPSSQVSQT  240
QSEVTIDTKR ANGLFSSFEE KHVLDNYTQW LQSTSSMEGS LLEAKPIQDD HISSLPEDLS  300
KLFSFIPSTE PISDWYSDSG ELSNGHSSGV TDACLDFDMQ QHMASLFPVT ATAEHGKASS  360
SWDNLPGIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	5e-51	MYB family protein