PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g674750.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 290aa    MW: 33690 Da    PI: 10.6594
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g674750.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.43.3e-181158148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT eEdell ++++q+G g W+ ++++ g++R++k+c++rw++yl
  Pd.00g674750.m01 11 KGAWTREEDELLRQYIQQYGEGKWHQVSHKAGLNRCRKSCRLRWLNYL 58
                      79********************************************97 PP
2Myb_DNA-binding40.75.6e-1364106145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       rg +T++E +l v++ k+lG++ W++Ia +++ gRt +++k++w 
  Pd.00g674750.m01  64 RGDFTEDEVDLMVRLRKLLGNR-WSLIAGRLP-GRTSNDVKNYWS 106
                       899*******************.*********.***********5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MEGNNLLRVR KGAWTREEDE LLRQYIQQYG EGKWHQVSHK AGLNRCRKSC RLRWLNYLSP  60
NIKRGDFTED EVDLMVRLRK LLGNRWSLIA GRLPGRTSND VKNYWSTRQR KNKSSRAEKD  120
KTLETTKTVI LRPQPRTFSK KSYFFSSPAP TLQHIQLKEN FNWPLPSSPP IENGIDEWKS  180
QSNSPQNQSL INPYPERSTT APLHHCTIIS RQPTTAPSSI TTQTHHQPYP PTTTVHDWVV  240
AARPTREENL SDVALEDGHV HHHLAAARGH EPSTAIKRCR RGWRRWDVVM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.12e-56MYB family protein