PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g672140.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 406aa MW: 44825.9 Da PI: 9.2768

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g672140.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.3	4.3e-30	115	174	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg++ pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ Pd.00g672140.m01 115 MNDGCQWRKYGQKIAKGNPRPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 174 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MKTDQELCFL QMEMSRMKEE NKVLRKGVEQ TMKDYYDLQM KFTSLHQSNQ NKDPQTFLSL 60 DGNDPDAVHG PKTIPKRSPN KLQKTELAGI SSHVASQPNR KARVSVRARC ESATMNDGCQ 120 WRKYGQKIAK GNPRPRAYYR CTVAPGCPVR KQVQRCLEDM SILITTYEGT HNHPLPVGAT 180 AMASTASAAA SFMLLESSNH HLLDGTPSNY HQASLPNYYN VPDHRMNPSS HSSSNFRTIN 240 PLDPSKGIVL DLTNNFYDHH NTPQNIPMGS SSSHSSVPPG FSNWMMSTSR SASSYQNPNS 300 ITSHLLANST ISRSSGVGVE DQRSWRGEEN NMSLAENVTA IASDPKFRLA VAAAITSLIN 360 KENHTANHPF GPRDGGENGS STSNNWALDH QSLSANGKPI RKNSLE

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MKTDQELCFL QMEMSRMKEE NKVLRKGVEQ TMKDYYDLQM KFTSLHQSNQ NKDPQTFLSL  60
DGNDPDAVHG PKTIPKRSPN KLQKTELAGI SSHVASQPNR KARVSVRARC ESATMNDGCQ  120
WRKYGQKIAK GNPRPRAYYR CTVAPGCPVR KQVQRCLEDM SILITTYEGT HNHPLPVGAT  180
AMASTASAAA SFMLLESSNH HLLDGTPSNY HQASLPNYYN VPDHRMNPSS HSSSNFRTIN  240
PLDPSKGIVL DLTNNFYDHH NTPQNIPMGS SSSHSSVPPG FSNWMMSTSR SASSYQNPNS  300
ITSHLLANST ISRSSGVGVE DQRSWRGEEN NMSLAENVTA IASDPKFRLA VAAAITSLIN  360
KENHTANHPF GPRDGGENGS STSNNWALDH QSLSANGKPI RKNSLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	8e-68	WRKY family protein